-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathsearchindex.js
1 lines (1 loc) · 41.9 KB
/
searchindex.js
1
Search.setIndex({envversion:47,filenames:["about","apidoc","apidoc/classlist","apidoc/files","apidoc/modules","apidoc/namespaces","changelog","contents","download","features_manual","guideline","guideline/plain-text-format","help","howto","howto/branch-and-release","howto/cmake-options","howto/configure-project","howto/create-and-modify-project","howto/document","howto/install","howto/manage-data","howto/nested-superbuild","howto/package","howto/run-automated-tests","howto/use-and-customize-templates","index","install","manual","people","quickstart","reference","sidebar","standard","standard/cmdline","standard/cmdline/bash","standard/cmdline/cxx","standard/execution","standard/fhs","standard/modules","standard/scripttargets","standard/template"],objects:{"":{"-DBASIS_ALL_DOC":[15,0,1,"cmdoption-DBASIS_ALL_DOC"],"-DBASIS_COMPILE_MATLAB":[15,0,1,"cmdoption-DBASIS_COMPILE_MATLAB"],"-DBASIS_COMPILE_SCRIPTS":[15,0,1,"cmdoption-DBASIS_COMPILE_SCRIPTS"],"-DBASIS_DEBUG":[15,0,1,"cmdoption-DBASIS_DEBUG"],"-DBASIS_DIR":[15,0,1,"cmdoption-DBASIS_DIR"],"-DBASIS_INSTALL_APIDOC_DIR":[15,0,1,"cmdoption-DBASIS_INSTALL_APIDOC_DIR"],"-DBASIS_INSTALL_RPATH":[15,0,1,"cmdoption-DBASIS_INSTALL_RPATH"],"-DBASIS_INSTALL_SCHEME":[15,0,1,"cmdoption-DBASIS_INSTALL_SCHEME"],"-DBASIS_INSTALL_SITE_DIR":[15,0,1,"cmdoption-DBASIS_INSTALL_SITE_DIR"],"-DBASIS_INSTALL_SITE_PACKAGES":[15,0,1,"cmdoption-DBASIS_INSTALL_SITE_PACKAGES"],"-DBASIS_MCC_FLAGS":[15,0,1,"cmdoption-DBASIS_MCC_FLAGS"],"-DBASIS_MCC_MATLAB_MODE":[15,0,1,"cmdoption-DBASIS_MCC_MATLAB_MODE"],"-DBASIS_MCC_RETRY_ATTEMPTS":[15,0,1,"cmdoption-DBASIS_MCC_RETRY_ATTEMPTS"],"-DBASIS_MCC_RETRY_DELAY":[15,0,1,"cmdoption-DBASIS_MCC_RETRY_DELAY"],"-DBASIS_MCC_TIMEOUT":[15,0,1,"cmdoption-DBASIS_MCC_TIMEOUT"],"-DBASIS_MEX_FLAGS":[15,0,1,"cmdoption-DBASIS_MEX_FLAGS"],"-DBASIS_MEX_TIMEOUT":[15,0,1,"cmdoption-DBASIS_MEX_TIMEOUT"],"-DBASIS_REGISTER":[15,0,1,"cmdoption-DBASIS_REGISTER"],"-DBASIS_SUPERBUILD_MODULES":[15,0,1,"cmdoption-DBASIS_SUPERBUILD_MODULES"],"-DBASIS_VERBOSE":[15,0,1,"cmdoption-DBASIS_VERBOSE"],"-DBUILD_BASIS_UTILITIES_FOR_":[15,0,1,"cmdoption-DBUILD_BASIS_UTILITIES_FOR_"],"-DBUILD_CHANGELOG":[15,0,1,"cmdoption-DBUILD_CHANGELOG"],"-DBUILD_DOCUMENTATION":[15,0,1,"cmdoption-DBUILD_DOCUMENTATION"],"-DBUILD_EXAMPLE":[15,0,1,"cmdoption-DBUILD_EXAMPLE"],"-DBUILD_MODULES_BY_DEFAULT":[15,0,1,"cmdoption-DBUILD_MODULES_BY_DEFAULT"],"-DBUILD_TESTING":[15,0,1,"cmdoption-DBUILD_TESTING"],"-DCMAKE_BUILD_TYPE":[15,0,1,"cmdoption-DCMAKE_BUILD_TYPE"],"-DCMAKE_INSTALL_PREFIX":[15,0,1,"cmdoption-DCMAKE_INSTALL_PREFIX"],"-DDEFAULT_TEMPLATE":[26,0,1,"cmdoption-DDEFAULT_TEMPLATE"],"-DDEPENDS_ITK_DIR":[26,0,1,"cmdoption-DDEPENDS_ITK_DIR"],"-DDEPENDS_MATLAB_DIR":[26,0,1,"cmdoption-DDEPENDS_MATLAB_DIR"],"-DINSTALL_TEMPLATE_DIR":[26,0,1,"cmdoption-DINSTALL_TEMPLATE_DIR"],"-DITK_DIR":[15,0,1,"cmdoption-DITK_DIR"],"-DMATLAB_DIR":[15,0,1,"cmdoption-DMATLAB_DIR"],"-DSPHINX_DIR":[15,0,1,"cmdoption-DSPHINX_DIR"],"-DUSE_":[15,0,1,"cmdoption-DUSE_"],"-DWITH_BASH":[26,0,1,"cmdoption-DWITH_BASH"],"-DWITH_ITK":[26,0,1,"cmdoption-DWITH_ITK"],"-DWITH_Perl":[26,0,1,"cmdoption-DWITH_Perl"],"-DWITH_Python":[26,0,1,"cmdoption-DWITH_Python"],PATH:[19,1,1,"-"],PERL5LIB:[19,1,1,"-"],PYTHONPATH:[19,1,1,"-"]}},objnames:{"0":["std","option","option"],"1":["std","envvar","environment variable"]},objtypes:{"0":"std:option","1":"std:envvar"},terms:{"0rc2":14,"210be3765dde2c34f20d085ec293bed8":21,"6_note":16,"__dir__":39,"__init__":6,"_basis_executabletargetinfo_sanit":6,"_config":[24,40],"_dir":[6,19,23],"_exec_dir":36,"_found":[6,17],"_libexec_dir":36,"_root":6,"_software_manu":18,"_target":6,"_use_fil":6,"_util":6,"boolean":[6,26,38],"break":[16,37],"case":[6,11,12,14,15,16,17,18,19,23,26,29,36,37,38,39,40],"catch":35,"char":35,"class":[],"const":35,"default":[],"export":[],"final":[11,12,14,16,18,23,36,39,40],"float":35,"function":[0,1,6,8,12,15,16,17,18,19,25,27,29,30,35,36,37,38,39],"import":[0,6,11,12,14,16,17,18,19,23,36,37,38,39,40],"int":[15,35],"long":[11,23,35],"new":[],"public":[],"return":[6,21,35,36],"short":[16,35,38],"static":[16,19,37,40],"super":[16,37,40],"switch":[6,12,21,35,37,38],"true":[15,16,17,35,38,39],"try":[16,23,30,35],"var":[23,36],"while":[11,16,17,37,38,39,40],abi:14,abil:[17,36],abl:[16,17,18,19,23,26,40],abov:[15,16,17,18,19,23,26,29,35,36,40],absolut:[],accept:[6,16,35,36],access:[15,19,35],accomod:16,accompani:40,accomplish:[18,19,25,26,27,29],accord:[11,14],account:[6,16,37],acquir:40,acronym:[16,40],across:[16,35],action:19,actual:[0,6,15,19,21,23,24,26,33,36,37,38,40],ad9d7dd1ca7c10bf0592a8227c452354:21,add:[],add_custom_command:18,add_definit:16,add_execut:30,add_librari:12,add_subdirectori:38,add_test:6,addit:[6,14,15,16,18,19,21,22,23,24,36,37,40],addition:[19,36,38],additional_make_clean_fil:21,additon:[16,37],address:[12,30,36],adjust:[],admin:23,administr:[],adopt:[0,18],advanc:[],advantag:[18,19,36],advisor:[0,28],affect:[6,36],afni:6,aforement:16,after:[6,8,12,14,15,16,17,18,19,23,26,29,36,39,40],afterward:39,again:[6,15,17,19,26,29,39],against:[6,37],agogo:18,agreement:8,aim:[0,17,36,38],algorithm:33,alias:36,all:[6,8,11,12,14,15,16,17,18,19,21,22,23,24,26,29,30,35,36,37,38,39,40],allow:[0,6,8,14,15,16,17,18,23,36,38,39],almost:40,alon:[19,26],along:[16,19,29],alreadi:[6,12,15,16,17,19,21,23,26,29,35,38,39],also:[0,6,12,14,15,16,17,18,19,21,23,24,26,29,30,35,36,37,38,39,40],altern:[6,15,16,17,18,19,29,38],alwai:[14,16,17,18,21,23,36,37,38],among:[6,19,36,38,40],amount:[15,37],analysi:[0,6,8,11,16,23,24],andrea:[0,8,18,28],andrew:[0,8,28],ani:[],anisotrop:35,anisotropicfilt:35,anoth:[6,14,15,16,17,19,23,29,36,37,38,40],anticip:36,anyon:40,apidoc:[6,18,19,40],appear:40,append:[6,18,19,21],appli:[14,16,19,26,36,37,40],applic:[6,15,18,36,37,40],approach:[16,36,38],appropri:[15,19,36,38,40],apt:19,arab:6,arch:19,architectur:[19,40],archive_output_directori:37,aren:40,arg:[35,40],argc:35,argh:18,argn:21,argn_nam:21,argn_unparsed_argu:21,argn_vers:21,argument:[],argv:35,arpack:6,arrai:36,articl:[14,40],ask:[],aspect:[0,16,30,38],assist:37,associ:[14,36],assum:[16,17,18,19,26,40],assumpt:16,atla:[17,37],atlas:37,atlassian:37,attach:[16,19,26],attempt:[12,16],attribut:[6,16,17],author:[6,8,18,30,40],autom:[],automat:[6,9,15,16,17,18,19,24,25,36,37,38,40],auxiliari:[6,8,17,19,30,36,37,39,40],avail:[],avoid:[6,12,16,18,19,26,29,36,37,38,39],awai:[16,38],awar:[15,16,17,19],back:[14,23,37],backup:17,backward:6,bar:[18,19,29],base:[],baselin:[26,40],bash:[],bash_execut:6,bashrc:[19,23,26],basic:[],basis_:[6,12,16],basis_add_:[6,12,16],basis_add_compon:16,basis_add_component_group:16,basis_add_custom_target:18,basis_add_depend:18,basis_add_doc:[6,18,40],basis_add_doxygen_doc:18,basis_add_execut:[6,16,29,30,38,39,40],basis_add_install_typ:16,basis_add_librari:[6,16,29,38,39,40],basis_add_mcc_target:6,basis_add_modul:38,basis_add_sphinx_doc:18,basis_add_subdirectori:[6,40],basis_add_test:[6,40],basis_all_doc:6,basis_array_to_quoted_str:6,basis_bash_util:[36,39],basis_bootstrap:16,basis_build_script_librari:6,basis_cmake_cache_arg:21,basis_cmd_:6,basis_compile_script:6,basis_config_prefix:6,basis_configure_download:16,basis_configure_sourc:6,basis_dir:[6,16,21,23],basis_doxygen_al:6,basis_dump_vari:6,basis_example_dir:29,basis_export_target:12,basis_finalize_target:6,basis_find_packag:[6,12,16,17,18,21,38],basis_found:[16,21],basis_ge_config:6,basis_get_last_changed_revis:6,basis_get_matlab_vers:6,basis_get_relative_path:6,basis_get_target_link_librari:6,basis_get_target_loc:6,basis_include_directori:[6,16],basis_instal:6,basis_install_directori:6,basis_install_prefix:16,basis_install_schem:[19,21,37],basis_install_sinfix:6,basis_install_sit:19,basis_library_dir:6,basis_link_directori:6,basis_md5:21,basis_perl_util:6,basis_project:[6,16,17,21,29,30,38,40],basis_project_begin:[12,38],basis_project_end:12,basis_project_modul:38,basis_sanitize_template_for_doxygen:18,basis_set_if_not_set:18,basis_set_project_properti:6,basis_set_properti:39,basis_set_script_path:39,basis_set_target_properti:[6,29,39],basis_site_dir:6,basis_superbuild_modul:38,basis_target_link_librari:[6,12,29],basis_target_uid:6,basis_template_dir:18,basis_url:21,basis_use_fil:12,basis_use_fully_qualified_target_uid:38,basis_use_packag:[6,12],basis_use_target_uid:[6,38],basisbootstrap:[16,18],basisconfig:[6,12,15,21],basisctest:23,basiscustomexport:12,basisexport:12,basispack:[16,22,30],basisproject:[],basisscriptconfig:[36,39],basistest:[],basistool:30,basisus:12,bat:36,batch:23,batmanghelich:[0,28],battl:16,beat:37,becaus:[15,16,17,18,23,36,38,40],becom:[16,23,36],been:[0,6,12,14,15,16,17,18,23,26,29,36,38,39],befor:[6,11,12,14,15,16,17,19,21,23,26,29,36,37,39],beforehand:19,begin:[23,29,40],behavior:14,behaviour:38,behind:[19,26],belhachemi:[0,28],believ:16,belong:[12,16,21,36,38],below:[12,14,16,17,18,19,23,24,30,37,40],benefit:40,besid:[16,19,23,38,40],best:[13,18,25,27,29],beta:14,better:[16,18,23],between:[12,15,16,19,23,29,37,40],big:6,bin:[19,23,26,29,36,37,39],binari:[],binary_dir:21,bind:6,biomed:[0,8,11,24],bit:19,blank:11,block:[11,35],bloi:[0,28],book:14,bookmark:18,bool:[15,19,21,23,26],boost:[6,9,23,25],boot:19,bootstrap:[],bootstrap_modul:18,both:[16,17,18,23,37,38,40],bother:23,bound:8,bourn:[19,29],box:[6,15,16],brain:35,branch:[],brand:11,breath:[6,18],breif:35,brief:[17,18,19,21,30,40],briefli:[8,40],brows:8,browser:18,bsd:[6,8,40],bug:[6,12,14,37],build:[],build_:6,build_all_modul:[17,23,38],build_appl:[6,29],build_document:[15,19,21],build_exampl:[6,29],build_install_script:39,build_modules_by_default:38,build_project_tool:[],build_softwaremanu:18,build_test:26,builder:18,built:[6,12,15,16,17,18,19,26,29,30,36,37,38,39,40],bullet:11,bullsey:16,bundl:[6,16,19,21,36,37,38,40],bundle_depend:21,bundle_external_project:[16,21],bundle_nam:21,bundle_name_l:21,bundle_name_u:21,bundle_project:21,bundle_source_dir:21,bundle_vers:21,cach:[6,16,21,38],call:[],came:25,can:[6,8,12,15,16,17,18,19,20,21,22,23,24,26,29,30,35,36,37,38,39,40],candid:[6,14,37],cannot:[15,16,17,18,38],capit:[11,17,19],care:[12,16,38],carnegi:[8,18],carri:14,categori:37,caus:[6,16,17,40],cbica:[11,21,40],ccmake:[15,17,19,23,26,29,38],cdash:[],cento:19,cerr:35,certain:[0,16,17,19,23,26,30,36,39],certainli:19,chain:[9,25],chanc:16,chang:[],changelog:[6,15,19],charact:[6,11,16,23],check:[6,15,16,23,25,29,37],checkout:15,choos:[19,23,37,40],chosen:[16,19,37],christo:[0,28],chronic:23,circumv:21,clang:[19,26],claus:[6,8],clean:[21,23],clean_path:6,cleanup:17,clear:19,clearli:40,clearpag:[10,13,29],clone:[8,29],cmake_2:16,cmake_arg:21,cmake_binary_dir:21,cmake_build_typ:21,cmake_cache_arg:21,cmake_command:[18,21],cmake_compiler_is_gnu_cxx:16,cmake_current_binary_dir:[18,21],cmake_current_list_fil:21,cmake_current_source_dir:[18,21],cmake_find_library_suffix:6,cmake_install_prefix:[16,17,19,21,23,26,29,37,39],cmake_install_prefix_initialized_to_default:21,cmake_minimum_requir:21,cmake_module_path:21,cmake_parse_argu:21,cmake_path_prefix:6,cmake_prefix_path:21,cmake_project_nam:6,cmake_skip_rpath:[15,16],cmakelist:[],cmakeparseargu:21,cmd:[35,36],cmdline:[6,35],cmdlineexcept:35,code:[],code_dir:[6,16],cohes:40,collect:[16,19,26,29,38],collis:16,column:[11,23],com:[8,29,36],combin:[16,25,27],come:[21,23],command:[],comment:[6,18,19,23,26,36,40],commit:[14,19],common:[],commonli:[17,18,29,33,35,36,37],commun:36,comp_spac:23,compar:[15,37],comparison:[6,17,26],compat:[6,11,16,40],compil:[6,12,15,16,17,19,26,36,37,38,39,40],complet:[6,8,18,30,34,38,39,40],complex:16,compli:15,complianc:[37,40],complic:36,compon:[],componen1:16,component2:16,comprehens:0,compress:19,comput:[17,23,37,40],con:36,concentr:0,concept:[6,13,16,29,37,38],conceptu:40,conf:[6,17,23,36],config:[],config_dir:16,configset:[16,40],configur:[],configuraton:6,configure_fil:[39,40],configus:40,configvers:40,conflict:[],conform:[13,37],congratul:29,connect:23,consecut:[14,15,23],consid:[6,12,16,17,19,36,37,40],consider:[16,36],consist:[14,17,40],constant:[6,36],constitut:40,constraint:38,constructor:[35,36],consult:23,contact:[6,17,18,19,21,35,40],contain:[],context:36,contextu:37,continu:[9,14,16,19,21,23,25,26],contribut:[8,16,30,40],contributor:[0,28],control:[9,14,16,17,23,25,37],conveni:[15,17,39,40],convent:[],convers:[6,16],convert:[6,23],copi:[],copy_if_differ:18,copyright:[6,8,11,18,21,30,40],copyrigth:40,correct:[17,23,36,37,38],correctli:[18,36,38],corresond:14,correspond:[6,8,11,12,14,16,17,18,19,23,30,36,37,38,39,40],costli:16,could:[15,16,29],counterpart:16,cover:38,coverag:[],cpack:[9,16,22,25,30,38,40],cpack_add_compon:16,cpack_add_component_group:16,cpack_add_install_typ:16,cpack_configure_download:16,cpack_package_contact:6,cpack_source_ignore_fil:[16,22],cpp:16,creat:[],creation:[6,9,14,17,18,25,30],credenti:[15,19],creleas:6,cron:[],crontab:23,cross:[16,19,26],csh:29,css:18,ctest:[6,9,16,19,23,25,26,30,40],ctest_coverag:16,ctestconfig:[6,16,23,40],ctestcustom:40,cuda:17,cuda_found:17,current:[6,16,17,18,19,21,23,24,26,36,37,38,40],currentvers:21,custom:[],customiz:[6,9,25],customlayoutproject:16,cversionandrevis:6,cxx:[6,18,29,35],cygwin:[19,29],dag:6,dai:[23,40],darwin:19,dash:6,dashboard:[23,40],data:[],data_dir:39,dataset:[19,37],date:[11,15,23,40],datetim:40,davatziko:[0,28],dbasis_all_doc:[15,21],dbasis_compile_matlab:15,dbasis_compile_script:15,dbasis_debug:15,dbasis_dir:[15,21],dbasis_install_apidoc_dir:[15,19],dbasis_install_rpath:[15,16],dbasis_install_schem:[15,19,37],dbasis_install_site_dir:[15,19],dbasis_install_site_packag:[15,19],dbasis_mcc_flag:15,dbasis_mcc_matlab_mod:15,dbasis_mcc_retry_attempt:15,dbasis_mcc_retry_delai:15,dbasis_mcc_timeout:15,dbasis_mex_flag:15,dbasis_mex_timeout:15,dbasis_regist:[15,19,21,38],dbasis_superbuild_modul:[15,38],dbasis_verbos:15,dbuild_basis_utilities_for_:15,dbuild_changelog:15,dbuild_document:[15,18,19,21,23],dbuild_exampl:[15,21,23],dbuild_modules_by_default:15,dbuild_project_tool:21,dbuild_shared_lib:21,dbuild_test:[15,21,23],dbundle_external_project:21,dbundle_nam:21,dbundle_project:21,dbundle_source_dir:21,dcmake_build_typ:[15,21],dcmake_install_prefix:[15,16,18,19,21],ddefault_templ:26,ddepends_itk_dir:26,ddepends_matlab_dir:26,ddramms_source_dir:21,ddrammsfastpd_dir:21,deb:19,debug:15,decid:[0,16,17,19],decis:0,declar:[6,15,16,29,36],dedic:29,defaul:21,default_modul:6,default_templ:6,defer:[15,38],defin:[0,6,10,11,12,13,14,15,16,18,19,21,23,24,28,30,35,36,37,38,39,40],definit:[6,12,16,40],deinstal:[],del:6,delai:[15,36],delet:[17,19,23],demand:36,demonstr:[16,29,35,36],denot:37,dep:40,depart:11,depend:[],depends_:6,depends_modul:18,deprec:6,depth:[8,16,25,29,40],deriv:[15,16,19,40],desc:40,describ:[11,13,14,17,18,19,20,22,23,24,36,37,38,39,40],descript:[12,15,16,17,18,19,24,26,29,35,37,38,40],design:[16,29,38,40],desir:[11,16,18,21,23,37],destdir:[6,23],destin:23,detail:[6,11,14,15,16,17,18,19,23,24,26,32,35,36,37,38,40],determin:[6,16,23,36,39,40],dev:21,develop:[],deviat:35,dictat:40,dictionari:36,did:[14,40],diff:40,differ:[6,16,17,18,19,22,23,26,29,36,37,38,39,40],difficult:16,diffus:35,digit:14,dimens:35,dinstall_link:23,dinstall_prefix:23,dinstall_sinfix:23,dinstall_template_dir:26,dir:6,dirctli:40,direct:[6,16,18,36],directli:[6,15,16,19,23,36,38,39],directori:[0,1,6,12,15,16,17,18,19,21,23,24,26,29,30,36,37,38,39,40],directoriesset:37,diretori:19,dirhtml:[18,19],disabl:[6,15,16,18,19,36,38],disalb:16,discard:17,discov:6,discoveri:6,discuss:[36,39],disk:[19,23],displai:[16,18,23,35],distinguish:[29,37],distribut:[],ditk_dir:[15,21],divid:[18,37],divis:[16,40],dmatlab_dir:15,dnifticlib_dir:21,doc:[6,8,15,18,19,30,37,40],doc_dir:16,docproject:18,docproject_software_manu:18,documen:[],document:[],documentaiton:18,docutil:18,doe:[6,12,16,17,19,23,26,36,40],domain:14,dominiqu:[0,28],don:36,done:[12,15,16,17,18,21,23,30,36,37,38],dot:[6,12,14],doubl:[16,35],doublearg:35,download:[],download_command:21,download_dir:21,downsampl:37,dox:[6,18,40],doxyfilt:30,doxygen:[],doxygen_extra:18,doxygen_foot:18,doxygen_head:18,doxylink:[6,18],doxylink_url:18,dramat:[15,38],dramm:[16,21,23],dramms_depend:21,dramms_source_dir:21,drammsbundl:21,drammsfastpd:21,drammsfastpd_dir:21,drammsfastpd_found:21,drive:36,driver:[6,21,23,26,37],dry:23,dsphinx_dir:15,dtest_before_instal:21,dual:19,due:[6,16,17,18,23],dump:[6,39],duplic:6,dure:[6,15,16,17,19,24,26,29,30,36,39,40],duse_:15,duse_bash:21,duse_itk:21,duse_jythoninterp:21,duse_matlab:21,duse_perl:21,duse_pythoninterp:21,duse_sphinx:21,duse_system_nifticlib:21,dwith_bash:26,dwith_itk:26,dwith_perl:26,dwith_python:26,dynam:36,e8b7aa455bad254fe16434f1c601b66:21,each:[0,6,8,9,10,11,12,14,15,16,17,18,19,21,23,25,30,33,35,36,37,38,39,40],earli:[0,17],earlier:29,eas:[19,26,29,30],easi:[12,18,24,25,27,30,40],easier:[6,11,33,40],easiest:[19,26],easili:[36,40],echo:[36,39],eclips:16,edit:[14,16,17,18,21,23,29,40],edu:[11,21,35,40],effect:[15,16],eigen3:6,either:[6,8,11,15,16,17,19,21,23,26,35,36,37,38,39,40],element:18,els:[21,35,39],elsewher:29,email:[11,19],emb:18,emphas:16,emploi:10,empti:[6,17,19,26,29,39],enabl:[6,15,16,19,22,26,36,38],enclos:16,encount:[6,16],encourag:16,end:[12,16,17,39],endfunct:18,endif:[16,18,21,38,39],endl:35,endless:[6,21],endmacro:21,engin:[6,23],enhanc:6,enough:[12,19],ensur:[6,16,23,36,38],enter:19,enterpris:19,entir:[6,24,37,38],entireti:37,entiti:37,entri:[6,23,40],enumer:11,env:[19,39],environ:[],ep_prefix:21,epub:18,equal:[11,16,38],error:[6,15,16,17,23,35],essenti:[29,37],establish:18,etc:[14,15,19,23,26,36,37],evalu:39,even:[6,11,15,16,17,18,21,23,26,29,38,40],eventu:[16,38,39],everi:[12,15,23,30,40],everyth:24,evil:36,exactli:24,examin:16,exampl:[],excel:37,except:[14,19,22,35],excerpt:16,excess:40,excl:29,exclud:[6,14,16,18,22,23,26,38,40],exclude_basis_modul:6,exclude_basis_util:6,exclude_from_al:18,exclude_pattern:18,exclus:6,exec:23,execut:[],executabletargetinfo:6,execute_process:6,executing_in_build_tre:6,exedir:[36,39],exenam:[35,36],exepath:36,exhaust:19,exist:[],exit:[17,19,23,29,35,36,39],expand:6,expand_alias:36,expans:36,expect:[15,37,40],expens:36,experi:[16,40],experiment:[15,23,38],explain:[13,24,30,37,40],explicit:[6,23,38],exploit:17,exporttool:12,express:6,ext:19,extend:[0,6,16,17,18,35,38],extens:[6,8,12,18,19,29,36,37,39,40],extern:[6,14,16,17,18,21,36,38,40],externaldata:20,externalproject:[16,21,38],externalproject_add:[16,21,40],extra:[6,18,19,26],extract:[],fact:16,fail:[6,16,17,19,26,36,39,40],failur:6,fairli:40,fall:37,fals:[6,15,16,17,35,38,39],falsli:6,familar:40,famili:[],familiar:14,faq:18,far:29,faster:33,fastest:[17,24],fastpd:21,fastpd_demovers:21,fastpd_md5:21,fastpd_url:21,fatal_error:16,favicon:18,feasibl:16,featur:[],feedback:[14,38],few:[29,36,37,38],fewer:16,figur:16,file:[],filenam:6,filesystem:[],filter:[],find:[1,6,12,16,17,19,21,24,37,38,40],find_basis_packag:6,find_packag:[6,12,16,17,21,40],findbla:6,findboostnumericbind:6,findcuda:17,findmatlab:[6,17],findmosek:6,findnifticlib:[6,17],findopencv:6,findpackag:16,findperllib:6,findpythoninterp:6,findpythonmodul:6,findsphinx:6,findsvmtorch:6,fine:[12,19],finish:[15,29],first:[],fix:[6,14,15,17,37,40],flag:[6,15,16,35,40],flann:6,flavor:18,flexibl:36,flow:37,focu:33,folder:[17,18],follow:[0,6,8,10,11,12,14,15,16,17,18,19,21,22,23,24,26,28,29,30,32,33,35,36,37,38,39,40],foo:29,foobar:29,forc:[],forget:14,fork:8,form:[11,38],format:[],former:[0,28],formerli:23,fortran:18,found:[6,12,15,16,17,18,19,21,26,35,36,38,40],four:11,framework:[9,25,36],frequent:[],from:[],front:40,full:[8,15,17,18,24,35,36],fulli:[12,25,27,38],further:[6,8,15,16,17,19,23,30,35,36,37],furthermor:[17,19,36],futur:[6,16,33,36],gaussian:35,gaussian_radiu:35,gaussian_std:35,gaussianfilt:35,gcc:16,gcov:16,gener:[],german:37,get:[],get_executable_directori:36,get_executable_path:6,get_filename_compon:[18,21],get_real_path:6,getvalu:35,gflag:[9,25],git:[],gitflow:37,github:[6,8,12,16,18,26,29],give:[16,35,36],given:[6,14,15,16,17,18,19,22,23,26,29,30,36,37,39],glanc:15,glistr:23,glob:6,global:[16,21,38],globaltoc:18,gmock:[6,18],gnu:[16,17,19,26,29],goal:[16,37,40],good:35,googl:18,graph:16,graphic:[19,33],greatli:0,grid:[6,23],group:[6,21,24,35,38,40],gtest:[6,9,18,25],guarante:36,gui:[15,16],guid:[],guidelin:[],haiku:18,hand:15,handl:[6,18,35,36],happen:12,hard:37,harditk:23,hardwar:19,hash:36,hashbang:36,hat:19,have:[6,8,12,14,15,16,17,18,19,21,23,24,26,29,34,38,39,40],have_:6,have_sstream:6,head:[11,18],header:[],health:23,heart:37,heavili:12,heirarchi:37,hellobasi:29,hellobasis_rsc_dir:29,helloc:29,hellotoplevel:[],help:[0,6,8,13,16,17,19,23,24,26,28,33,35,38,40],helpman:35,helpshort:35,helpxml:35,henc:[11,14,17,23,26,36,39,40],here:[11,16,17,18,21,23,29,36,37,40],hidden:[6,17],hierarchi:[0,15,19,37,38],highli:40,highlight:17,hint:6,hkey_local_machin:21,home:[19,23,29],host:[6,8,18,19],hostnam:23,hour:23,how:[],howev:[10,12,15,16,17,18,19,23,26,29,35,36,37,39,40],html:[6,9,11,16,18,19,21,25,40],html_destin:18,html_extra_stylesheet:18,html_favicon:18,html_footer:18,html_header:18,html_logo:18,html_sidebar:18,html_theme:18,http:[8,11,16,18,20,21,23,29,40],huge:37,hundt:[0,8,28],i386:19,ico:18,icon:18,idea:[0,40],ident:[6,16,29,37],identif:35,identifi:[6,17,40],iexecutabletargetinfo:36,ifram:18,ignor:[6,19,26,35,36],ignore_rest:35,imag:[0,6,8,11,16,17,24,26,33,35,37],imagefil:35,imageprocess:16,imit:36,immedi:[15,23],impact:29,implement:[],importantli:[25,27],importtool:6,improv:[0,6,17,24,39],inc:18,incl:16,includ:[0,6,8,9,12,15,16,17,18,19,21,22,23,24,25,26,29,30,35,36,37,38,39,40],include_dir:16,include_directori:[6,16],inclus:[6,12,36],incompat:16,increas:[6,14,35,37],inde:19,indent:11,independ:[6,17,30,36,38,40],index:[18,40],indic:[14,17,29],indirectli:40,individu:[11,16,36,39],infinit:6,info:[6,36,37],inform:[12,14,15,16,18,19,23,25,26,30,35,36,37,39,40],inform_us:16,infrastructur:23,inherit:[6,18],initi:[],inlin:18,input:[15,16,18,19,35,37,40],insensit:6,insert:[11,17,19,21],insid:[6,16,17,19,26,36,38,39,40],instal:[],install_archive_dir:37,install_command:21,install_config_dir:37,install_data_dir:[37,39,40],install_doc_dir:[18,37],install_example_dir:[37,40],install_include_dir:37,install_info_dir:37,install_libexec_dir:37,install_library_dir:37,install_man_dir:37,install_rpath:[15,16],install_runtime_dir:37,install_share_dir:37,install_sinfix:6,instanc:[15,35,39],instanti:[17,40],instantli:24,instead:[6,11,14,15,16,17,18,19,21,23,29,36,38,39,40],instruct:[6,11,15,18,19,22,23,24,29,30,38,40],intal:37,integ:35,integr:[],intel:19,intend:[6,11,19,33,39],interact:23,interest:[15,17,18,23],interfac:[],intern:[6,12,14,16,21,36,40],interoper:40,interpret:[6,15,21,26,36,39],interrupt:15,interv:23,intro:[18,40],introduc:[6,17,18,29,36,39,40],introduct:[11,16,25],introductori:[6,40],invalid:[14,35],investig:25,invoc:[23,38],invok:[18,29,36],involv:23,iokernel:16,is_absolut:21,is_dir:6,is_directori:21,is_fil:6,issu:[],iter:14,itk:[6,15,16,17,20,21,23,26,38,40],itk_dir:[6,21],itk_release_4:20,itkconfig:26,itself:[6,11,12,15,16,18,19,21,23,26,29,30,36,38,39,40],java:[],javadoc:18,job:[],join:8,just:[6,16,18,21,29,36],jyhton:6,jython:[6,16],jythoninterp:16,kayhan:[0,28],keep:[14,16,17,19,23,34,36],kei:[15,16,36],kept:[6,37],kernel:35,kilian:[0,28],kind:[12,29],know:[6,17,37],known:[6,16,17,18,19,23,26,38,39,40],lab:[17,23],label:35,lang:[6,15],languag:[],larg:[15,37,38,40],last:[6,16,17,19,23,36,37,38],later:[17,23],latest:[6,8,18,29],latex:[18,19,26],latex_master_doc:18,latex_titl:18,latter:[18,19,40],launch:15,layout:[],lcov:16,ld_library_path:36,lead:[6,36],learn:[25,29],least:[11,14,16],leav:[8,15],left:[19,26,37],legend:37,less:[16,19,38,40],let:17,letter:[11,19],level:[],lib:[6,9,19,21,23,24,25,26,30,36,37],libexec:36,libexec_dir:36,librari:[],library_output_directori:37,licens:[],lightweight:[11,18,19,38],like:[17,18,19,26,29,36,38,40],limit:[11,19,36,38],line:[],link:[6,8,16,18,26,36],link_directori:6,linker:[6,16],linux:[8,19,26,29,36,37],lion:6,list:[],listfil:40,live:19,load:[23,36,38,39],loadabl:19,loader:36,local:[],localhost:18,locat:[6,12,15,16,18,19,23,24,26,36,37,38,39,40],log:[6,19,23,26],logo:18,logo_titl:18,longer:[6,15,16,17,19,23],look:[6,8,12,16,17,18,23,36,40],lookup:[17,37],loop:6,lose:12,lost:12,low:37,lowercas:[6,19,37],luke:[0,28],mac:[],machin:[19,23,29,40],macro:[0,6,21,30],mad:[9,24,25,26],made:[12,14,17,35,40],mai:[10,15,16,17,18,19,21,23,24,26,36,37,38,40],main:[6,18,19,23,26,30,35,36,37,40],mainli:[23,36,38],mainpag:18,maintain:[6,8,17,18,19,23],mainten:14,major:[14,19,37],make:[6,11,14,15,16,17,18,19,21,22,23,25,26,27,29,30,36,37,39,40],make_directori:6,makefil:[],man1:37,man3:37,man:[18,35,37],man_pag:18,man_sect:18,manag:[],mani:[9,16,18,25,26,30,36,40],manifest:[19,26],manipul:36,manner:[24,38],manual:[],manual_sect:18,map:[6,36],mark:[6,17,18,19],mark_as_advanc:21,markdown:[],marker:17,market:11,markup:[11,18,19],master:[],master_doc:18,match:[6,17,21,22,36],mathwork:36,matlab:[],matlab_execut:6,matlab_releas:6,matlabvers:6,matter:[6,23,38],maxim:[17,38],mcc:[6,15,16,17,19,26],mccbuild:6,mdown:40,mean:39,mechan:39,medic:[17,37],meet:[16,40],mellon:[8,18],member:[23,24],memcheck:[6,23],memori:23,mercuri:[],merg:[],messag:[6,15,16,17,35,38],meta:[8,15,16,21,38],metadata:40,method:36,mex:[6,15,16,17,19,26],mexext:6,mfile:6,mico:23,microsoft:[8,19,21],midnight:23,might:[19,23],mime:40,min:15,mind:[23,34],mine:17,minim:[23,40],minimum:[6,19,26],minor:[6,14,19,37],minut:[15,19,23],mislead:6,miss:[6,17,21,23,40],mistak:6,mkdir:[17,18,19,23,26,29],mock:18,moda:29,moda_dir:29,modb:29,modb_dir:29,mode:[6,15],model:[23,37],modern:18,modif:[17,23,36],modifi:[],modul:[],modulaa:16,modular:[],module1:6,module2:6,module_:[15,38],module_dir:16,module_moda:29,module_modb:29,module_nam:38,modulea:16,moduleb:16,modulec:16,moduleconfig:6,modules_dir:16,moduleus:6,moment:[23,29,36,39],month:[23,40],more:[6,9,11,15,16,17,18,19,23,25,26,27,29,36,38,39,40],moreov:[11,15,16,17,19,21,22,23,36,38,39,40],most:[15,16,17,18,19,23,33,35,36,37,39,40],mostli:40,move:6,much:[12,18,40],multipl:[6,16,23,29,37,38,40],multiuintarg:35,must:[11,12,16,17,18,23,24,30,36,37,38,40],mymodul:17,myproject:[17,24],mytempl:24,mytoolkit:17,name:[],namespac:[],nativ:[18,19,26],natur:18,navig:[11,18,40],necessari:[21,40],need:[6,12,15,16,17,19,23,24,26,29,36,38,39,40],neither:23,nest:[],network:[23,36],never:[17,40],newer:[19,30,40],newli:29,newlin:16,next:[],nice:[11,36],nifticlib:[17,21],nifticlib_dir:21,nifticlib_found:21,nifticlib_md5:21,nifticlib_url:21,night:23,nightli:[6,23],nii:35,ninja:[19,26],no_html_index:18,no_html_modindex:18,noconfig:17,noexampl:[17,29],non:[6,15,16,23,39],nonetheless:16,nor:14,normal:19,notabl:[0,28,40],noth:21,notic:[8,16,17,30],now:[6,14,17,18,29],nowadai:11,number:[6,8,11,14,15,16,18,23,35,36,37,38],numer:6,nvie:37,obei:38,object:[6,16,19,23],obsolet:[6,16],obtain:[15,19,26],occasion:17,occupi:23,occur:[6,15,17,38],off:[6,15,16,19,21,23,26,38],often:[14,15,16,17,19,23,26,30,37,38,39,40],old:23,olympu:23,omit:[12,19,26,29],onc:[14,15,18,19,23,35,37],onli:[0,6,12,14,15,16,17,18,19,22,23,24,26,29,30,33,35,36,37,38,39,40],onlin:[8,18],open:[0,6,8,12,16,18,19,23,25,26,27],opencv:6,opensus:19,oper:[8,16,19,26,29,36],oppos:39,opt:[15,19,21,37],option:[],optional_compon:6,optional_depend:16,optional_test_depend:16,optus:6,oracl:[6,23],order:[6,14,15,16,17,19,23,26,29,30,36,37,38,39,40],org:[16,18,20],organ:[0,6,10,18,29,40],origin:[],other:[],other_dir:6,othermain:36,othermodul:[6,16,17],otherwis:[6,15,16,17,19,21,23,26,36,39,40],our:[17,19,23],out:[6,11,14,16,23,25,29,30,37],outlin:40,output:[],output_fil:18,output_file_var:18,output_nam:[6,18,29],outsid:[6,20,23,37],over:0,overrid:[6,12,16,38],overridden:[15,16,40],overriden:[15,16],overview:[],overwrit:6,overwritten:6,own:[8,10,16,18,19,23,24,26,29,35,36,37,38,40],packag:[],package_find_version_major:16,package_find_version_minor:16,package_nam:[12,16,38],package_sourc:22,package_vendor:16,package_vers:16,package_version_compat:16,package_version_exact:16,package_version_unsuit:16,packageconfig:[16,40],packageconfigvers:16,packagenam:16,page:[6,16,18,19,23,26,35,36,37,40],pagebreak:[27,30],parallel:23,paramet:[6,16,18,24,38,40],parent_scop:18,pars:[],parser:35,part:[0,6,12,14,15,16,17,18,19,23,24,29,30,33,35,36,37,38,40],particular:[6,10,14,16,17,18,19,21,22,23,26,29,30,35,36,37,40],particularli:19,pass:[6,14,16,18,21],password:23,patch:[14,16,19,21,37],patch_command:21,path:[],pattern:[6,16,18,22,29,36,39],pdf:[6,8,9,18,19,25,26],pdflatex:18,pennsylvania:[0,8,11,18,21,23,24,35,40],per:[6,19,35],perform:[6,14,16,17,19,23,24,26,37,40],perl5:19,perl5lib:19,perl:[],perl_execut:6,perllib:6,permiss:[15,19,23],philadelphia:11,philosophi:[9,12,25],pixel:18,pkg:[6,17,21,23],place:[16,17,37,38,40],placehold:[17,37],plain:[],plan:24,platform:[16,18,19,26],pleas:[12,14,16,17,19,24,26,35,36,37],plist:36,pohl:[0,28],point:[11,35],popul:[17,24,37],posit:[6,23,35],positionalarg:35,possibl:[],post_build:18,pound:23,power:19,ppc:19,practic:[13,25,27,29,37],precaut:36,preceed:[15,18],preconfigur:18,predefin:6,prefer:[11,16,18,19],prefix:[],prepand:36,prepend:[12,14,36],preprocessor:16,prerequisit:[],presenc:[26,38],present:[6,16,17,18,37,38,40],preserv:[23,39],preset:40,press:[15,17,19,26,29],presum:36,prettier:19,prevent:16,previou:[17,36,37,40],previous:[6,17,29],primari:40,primarili:38,print:[6,23],prior:[16,36,37],privat:[],pro:36,probabl:12,problem:[6,12,17,19,26,36],process:[6,14,16,18,23,25,27,33,37,39],produc:18,proecess:16,program:[0,6,9,10,15,16,17,18,19,21,25,30,33,35,36,37,38,40],programfilesdir:21,programm:37,progress:17,project:[],project_:6,project_binary_dir:37,project_code_dir:37,project_config_dir:[17,37,39],project_contact:6,project_data_dir:[37,39],project_doc_dir:37,project_example_dir:37,project_is_modul:38,project_modules_dir:[37,38],project_nam:[18,29],project_releas:6,project_source_dir:37,project_subdir:[6,37,40],project_testing_dir:37,project_tools_dir:18,project_vers:16,project_version_and_revis:6,project_version_major:16,project_version_minor:16,project_websit:18,projecta:36,projecttool:38,proper:[6,14,18,36],properli:[12,19,35,36,40],properti:[],propos:36,proprietari:19,prototyp:6,provid:[0,8,12,16,17,18,19,23,24,26,29,30,33,35,36,37,38,39,40],prvieou:14,pthread:6,pull:16,push_back:35,put:[16,40],pyc:15,pyramid:18,python2:19,python:[],python_execut:6,pythonhom:6,pythoninterp:16,pythonpath:19,qualifi:[12,36],question:[],queu:23,quick:[],quickli:40,quickstart:6,quiet:[16,21],quot:16,r2009b:[19,26],radiolog:11,radiu:35,ran:18,random:40,rare:16,rather:[0,16,33],read:[6,14,16,17,18,19,23,26,35,37,40],readabl:18,readi:[14,18],readm:[6,11,17,18,30,40],readonli:[6,36,39],realli:[17,38],reason:[15,16,23,36,37,40],recent:[17,18,19,23,26,29],recogn:[11,29],recommend:[10,12,15,16,18,19,24,26,29,35,37,38,40],reconfigur:[29,38],recurs:[6,16,21,40],red:19,redistribut:[],reduc:[6,15,23],redund:23,referenc:38,regard:[6,16,23,36],regardless:19,regener:[19,26],regex:18,regist:[15,38],registri:[6,15,19,21,37],regress:[6,16,30],rel:[],relat:[6,14,16,18,35,38,40],relev:16,reli:36,rellink:18,relocat:36,remain:[6,21],rememb:23,remov:[],remove_directori:6,remove_item:6,renam:[6,8,19,36,37],render:18,reorgan:6,repeat:[15,19],replac:[6,12,18,29,30,39,40],report:[],reportoir:18,repositori:[],repres:[14,19,26],request:[12,15,16,40],requir:[],research:33,reserv:[11,15,18,21],reset:6,resid:[37,38,40],resolut:[16,37],resolv:[],respect:[6,8,12,15,16,18,19,24,26,29,30,33,36,37,38,39,40],respectivlei:17,respond:23,respons:[18,19,36],rest:[15,18,19,21,35],restrict:36,restructur:18,restructuredtext:[6,9,11,18,19,25,26,40],result:[15,16,17,19,23,29,37,40],retri:15,retriev:[14,38],reus:[],reusabl:[16,17,38],review:14,revis:[6,14,17,34],rewrot:6,right:[11,12,16,18,21,37,38],robust:6,root:[6,8,12,16,17,18,19,23,26,29,30,37,38,40],row:23,rpath:[],rst:[6,18,40],rule:[11,40],run:[6,8,12,15,16,17,18,19,21,22,23,24,26,29,35,37],runtim:[17,35,36],runtime_output_directori:37,same:[6,12,16,17,18,19,21,24,29,36,37,38],save:[6,17,18,19,23,39],sbia:[0,6,8,11,17,18,19,21,23,24,26,28,35,40],sbiacdash:23,scenario:17,schedule_d:6,scheme:[],schuh:[0,8,18,28],scientif:40,scope:6,screen:23,script:[],scriptconfig:[],scroll:18,seamless:[25,27,37],search:[],searchbox:18,second:[12,14,15,16,23,36,39],section:[0,8,10,11,16,18,19,24,26,29,32,33,36,37],secur:[18,36],see:[8,11,12,14,15,16,17,18,19,21,22,23,24,26,29,34,35,36,37,38,39,40],seem:36,seen:[29,38],select:[14,16,17,18,19,22,26,37],self:38,send:16,sensit:[11,17,37],separ:[6,11,12,14,15,16,19,23,29,36,37,38,40],sequenc:[19,26],seri:14,serv:[],server:[16,18,19,23],session:[15,29],set:[],set_directory_properti:21,set_properti:21,setenv:29,settl:16,setup:[9,16,23,24,25,30,36,40],sever:[15,16,17,19,38],sge:[6,23],shadow:6,shall:[6,11,14,18,19,21,22,35,36,39,40],shape:[0,28],sharabl:[25,27],share:[6,15,16,17,19,23,29,36,37,38,40],shebang:36,shell:[6,19,23,26,29,36],shflag:34,shopt:36,should:[6,11,12,14,15,16,17,18,19,23,29,35,36,37,38,40],show:[15,23,29],side:[14,16,19,36,39],sidebar:[6,18],sidebarwidth:18,signatur:6,similar:[17,19,36,38,39,40],similarli:29,simpl:[],simplehttpserv:18,simpli:[17,18,19,23,24,35,36,37,38,39,40],simplic:18,simplifi:[6,30,40],sinc:[8,16,17,18,19,26,38],sinfix:6,singl:[6,16,19,23,29,37,38],site:[],site_dirhtml:19,situat:16,size:[37,40],skip:[6,15,16,19,21,23],slash:6,slave:[],slice:35,slicer:6,slide:[6,18],slight:6,slightli:[8,35],slow:6,small:[16,37],smaller:38,smart:12,smooth:35,smoothimag:35,softwar:[],softwaremanu:18,softwaremanual_build:18,softwaremanual_html:18,softwaremanual_pdf:18,sofwar:30,sole:37,solut:[19,33,36],some:[12,16,19,23,24,25,27,29,30,40],sometim:[16,38],soon:8,soruc:37,sourc:[],source_dir:21,sourceforg:[6,18],sovers:6,space:[6,11,15,16,19,23],special:[24,37,40],specif:[6,14,15,16,17,18,19,23,26,35,36,37,39,40],specifi:[6,12,15,16,17,19,21,23,24,26,29,36,37,38,39,40],speed:[38,39],spell:11,sphinx:[],sphinx_dir:6,sphinxdoc:18,split:[6,17,38],split_path:6,splitext:6,src:[8,23,29,30,37,38,40],stabl:14,stack:38,stamp_dir:21,stand:[19,26],standalon:[16,26,38],standard:[],start:[],starter:18,startup:15,state:[17,19,26,38,40],statement:[6,12,29,40],statu:19,std:35,stdio:6,stem:36,step:[],still:[6,12,15,16,17,36,38,39],store:[6,17,20,36,37,40],str:40,streamlin:0,street:11,strequal:6,strftime:40,string:[6,15,18,19,21,35,37,39],strip:19,structur:[0,14,16,17,18,19,24,36,37,39,40],studio:[6,16,19],style:[6,8,9,11,24,25,26],sub:[],subclass:35,subcommand:23,subdir:37,subdirectori:[6,16,17,18,19,24,29,30,37,38,40],subject:40,submiss:[6,23],submit:[19,23,40],submodul:[16,38],subnamespac:6,subprocess:[0,6,38],subproject:[6,11,15,16,29,30,38],subset:37,subsitut:40,substitut:[],subtl:16,subtre:16,subvers:[],success:[6,17,19,23,29],sudo:[19,23],sudosh:23,suffici:[18,38,40],suffix:[],suggest:[16,18,19,26],suit:[11,25,27],suitabl:16,summar:[8,15,16,19,26,36],summari:[8,16,30,40],sun:23,superbuild:[],superced:38,superproject:37,suppli:[17,25,27,30],support:[],suppress:[6,21],sure:[14,16,19],surpris:15,sustain:38,svg:18,svn2cl:19,svn:[],svnuser:23,svnwrap:23,switcharg:35,swtest:23,symbol:[6,16,38],synopsi:35,syntax:[6,16,18,40],system32:36,system:[],tab:[16,18],tag:[14,18,23,37,40],tailor:16,take:[15,16,18,19,36,38,40],taken:[12,36],tar:[19,21,22,26,29],tarbal:19,target:[],target_build_tmp:6,task:[13,25,30],tast:25,tbb:6,tcl:18,tclap:[18,35],tcsh:29,team:38,techniqu:[17,38],tediou:40,tell:21,templat:[],template_fil:18,template_nam:[18,40],temporari:[23,37],tend:21,term:6,termin:[6,19],test:[],test_before_instal:21,test_depend:16,test_main:18,testdriv:18,testing_data:20,testing_library_dir:37,testing_output_dir:37,testing_runtime_dir:37,text:[],tgz:16,than:[0,14,17,18,19,24,33,36,40],thank:29,thei:[16,36,37,39,40],them:[11,14,15,16,17,18,29,36,38,40],theme:[],themselv:[15,16],therefor:[14,15,16,17,19,23,29,30,36,37,38,39],thi:[0,6,11,12,14,15,16,17,18,19,20,21,22,23,24,25,26,27,29,30,34,35,36,37,38,39,40],those:[15,16,17,18,22,24,29,38],though:[11,15,16,23,34],three:[11,14,17,29,37,40],through:[8,11,16,18,23,36,38],throughout:15,thu:[8,12,15,16,17,18,19,23,29,30,33,36,37,38,40],ticket:12,tightli:38,time:[0,6,15,16,18,23,29,36,40],timeout:[6,15],titl:18,tmp:21,tmp_dir:21,to_str:6,todai:40,todo:30,togeth:[18,25,27],tolow:21,tool:[],tools_dir:6,top:[],topic:37,toplevel:[17,29,38,40],toplevel_dir:29,toplevelprojectwithcustommoduledirectori:16,toplevelprojectwithcustommodulesdirectori:16,topolog:38,toupper:21,toward:16,trace:38,track:35,tradit:18,trail:6,transform:[0,16,18],treat:[16,29,38,40],tree:[],tri:17,trick:16,trigger:[17,18,19,23,29],trilino:23,trivial:36,trunk:[6,14,23,37],turn:[12,17,40],tutori:[6,8,18,29,37],twice:39,two:[11,12,14,16,17,18,23,36,39],txt:[],typcial:15,type:[16,35,40],typedef:35,typic:[12,16,37,40],ubuntu:[6,19],uid:[6,12,36],umfpack:6,uncertain:[19,26],unchang:38,uncommon:38,undefin:6,under:[8,17,19,24,29,37],underlin:11,understand:[16,17,23,40],understood:18,undo:19,unfortun:36,uninstal:[],uninstall_:6,uniqu:[11,19,36],unit:[6,8,9,18,25,30,35,37],univers:[0,8,11,18,21,23,24,35,40],unix:[],unlabel:35,unless:[15,16,18,40],unlik:[29,39],unload:23,unnecessarili:16,unpack:29,unrecogn:18,unresolv:17,unset:[6,21],unsign:35,unsupport:[],until:[14,15,19,26,34,38],unus:[6,16,18,40],updat:[],upenn:[11,21,35,40],upgrad:[],uph:[11,21,23,35,40],upload:[14,16],upon:[0,6,12,17,18,29,39],uppercas:11,url:[19,21,23,37,40],url_md5:21,usabl:[18,29],usag:[6,12,23,29,33,35,37,38],use_:[6,15],use_bash:16,use_doxygen:16,use_itk:16,use_jythoninterp:16,use_matlab:16,use_perl:16,use_pythoninterp:16,use_sphinx:[6,16],use_system_basi:21,use_system_drammsfastpd:21,use_system_nifticlib:21,useitk:[6,17],useopt:[6,17],user:[6,11,12,14,15,16,18,19,21,23,24,29,30,33,36,37,38,40],usernam:23,userprog:29,usr:[15,19,23,37,39],usual:[6,12,16,18,19,23,26,37,38,40],utf8:40,util:[],utilitiestool:30,valid:[15,16,23],valu:[6,15,18,19,21,35,37,39,40],vari:36,variabl:[],variable_nam:39,variant:36,variou:[6,16,19,26,29,39],vector:35,vendor:[16,40],verbos:[15,19,35],veri:[6,16,36,37,38,40],verifi:19,versa:37,via:[6,16,18,21,23,36],vice:37,view:[15,18],virtual:19,virtualbox:19,visibl:6,visit:[18,36],visual:[6,16,19],voxel:35,vpn:23,vtk:[17,20],wai:[0,12,17,18,23,24,36,37,40],wall:16,want:[16,17,19,23,24,26,29,33,36,37,40],warn:[6,16,18,19,21,26,38],wast:16,web:[],websit:[],week:23,welcom:6,well:[0,6,10,16,17,18,19,23,26,38,39,40],were:[0,14,16,17,19,23,36,38,40],werror:16,what:[11,19,24,29,38],when:[6,12,15,16,17,18,19,21,23,24,29,36,37,38,39,40],whenev:[14,37,40],where:[0,6,11,12,14,15,16,17,18,19,23,25,26,29,36,37,38,39,40],wherea:38,wherev:12,whether:[15,16,17,21,23,26,36,38,39,40],which:[0,6,8,11,12,13,14,15,16,17,18,19,21,22,23,24,26,29,30,35,36,37,38,39,40],whitespac:[16,23],who:[16,18,23,29,30,33,40],whole:[25,27],whose:[16,23,36,40],why:[25,36,38],wide:[15,18,19,23],width:[6,18],wiki:[16,18,20,38],wikipedia:18,win32:[6,19,21],win64:19,win:[15,19,21],window:[],wish:[16,36],with_:6,within:[15,16,17,18,19,23,36,37,38,39,40],without:[6,15,16,17,19,23,24,26,29,36,37,38,40],wno:21,word:[11,16,24],work:[6,15,16,17,18,19,23,24,25,26,27,36,40],workflow:37,worthwhil:24,would:[0,6,12,16,17,19,21,23,36,38,40],wrap:[6,23,36],wrapper:[6,23],write:[],written:[12,15,16,17,18,19,20,29,34,39,40],wrong:36,wrote:6,www:[11,16,20,21,40],x86:19,x86_64:19,xcode:16,xml:[16,18,35],xoradd:35,xzf:[19,26,29],yangm:[0,28],year:[11,18,40],yellowdog:19,yet:[6,16,17,18,19,20,21,23,26,33,34,36,38],you:[8,12,14,15,16,17,18,19,23,24,26,29,37,38,40],your:[],yourself:[17,18],yum:19,zip:21},titles:["About","API Reference","Class List","Files","Modules","Namespaces","Release Notes","Table of Contents","Download","Features","Guidelines","Plain Text Format","Support","How-to Guides","Branch and Release","CMake Options","Configure a Project","Create/Modify a Project","Documenting Software","Install any Software","Managing Test Data","Nested Superbuild of BASIS and other Dependencies","Packaging Software","Automated Testing","Using and Customizing Templates","Home","Installation","CMake BASIS","People","Quick Start","Reference","<no title>","Standards","Command-line Parsing","Parsing the Command-line Arguments in Bash","Parsing the Command-line Arguments in C++","Calling Conventions","Filesystem Layout","Project Modularization","Build of Script Targets","Project Template"],titleterms:{"0rc1":6,"class":2,"default":24,"export":12,"new":17,"public":[16,29],about:0,absolut:36,add:29,adjust:23,administr:23,advanc:[15,26,40],ani:19,api:[1,18],apr:6,argument:[34,35],ask:12,aug:6,autom:23,avail:24,base:19,bash:[34,36],basi:[0,15,16,21,23,25,27,29],basic:30,basisproject:16,basistest:23,binari:[19,40],bootstrap:16,branch:14,build:[12,16,17,19,26,29,37,39,40],call:36,cdash:[16,23],chang:[24,29],cmake:[0,12,15,16,25,26,27,30,38],cmakelist:40,code:[8,16,29,37],command:[12,33,34,35],common:40,compon:16,config:16,configur:[12,16,17,19,23,29,39],conflict:17,contain:29,content:[7,8],convent:36,copi:29,coverag:16,creat:[17,18,24,29],cron:23,custom:[16,24,40],data:20,debian:19,dec:6,deinstal:[19,26],depend:[16,17,21,38],develop:18,distribut:[19,22],documen:40,document:[8,18],download:[7,8],doxygen:18,environ:[19,23,26,29],exampl:29,execut:29,exist:17,extract:19,famili:23,featur:[9,17,25],feb:6,file:[3,16,36,40],filesystem:[37,38],filter:18,first:29,forc:37,format:[11,18,40],frequent:[12,15],from:19,gener:[17,18],get:[25,29],git:37,guid:[13,18],guidelin:10,header:16,histori:0,how:13,implement:[36,38],initi:23,instal:[7,16,19,23,26,29,37],integr:23,interfac:16,issu:12,jan:6,java:36,job:23,jun:6,languag:[18,36],layout:[16,30,37,38,40],level:[17,29],librari:29,licens:8,line:[33,34,35],list:2,local:18,mac:19,makefil:19,manag:20,manual:[7,18],mar:6,markdown:18,master:23,matlab:36,mercuri:37,merg:[14,17],modifi:17,modul:[4,17,29,30,38],modular:[17,29,38],name:[19,36],namespac:5,nest:[16,21],next:29,note:[6,17],nov:6,oct:6,older:1,option:[15,19,26],origin:38,other:[16,21],output:18,overview:19,packag:[8,12,16,19,22,26],pars:[33,34,35],path:[16,36],peopl:[0,28],perl:36,plain:11,possibl:37,pre:6,prefix:16,prerequisit:[19,26,39],privat:[16,29],project:[16,17,29,30,38,40],properti:29,purpos:[0,36],python:36,question:12,quick:[18,29],redistribut:16,refer:[1,30],rel:36,releas:[6,14],remov:17,report:12,repositori:[29,37],requir:[8,19,26,38,40],resolv:17,reus:38,rpath:16,rpm:19,schedul:23,scheme:37,script:[19,23,29,39],scriptconfig:16,search:[16,36],sep:6,serv:18,set:[16,19,23,26,29],site:18,slave:23,softwar:[7,8,14,18,19,22,23],sourc:[8,19,22,29,37],sphinx:18,standard:[12,15,32,40],start:[18,25,29],step:[19,26,29,39],sub:29,substitut:40,subvers:37,suffix:29,superbuild:[16,21,38],support:[7,12,18],svn:23,system:8,tabl:7,target:[12,29,36,39],templat:[24,40],test:[16,19,20,23,29],text:11,theme:18,tool:30,top:[17,29],tree:37,txt:40,uninstal:19,unix:36,unsupport:36,updat:23,upgrad:17,util:30,variabl:38,version:[1,16,40],web:18,websit:18,window:[19,36],write:18,your:29}})