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Issues list

limit to number of chains in homooligomers
#69 opened Sep 18, 2023 by acarbn
1
O_chain_A = NaN and Global_Score=NaN
#29 opened Nov 15, 2022 by Germanki
1
Homooligimer while also fixing residues
#32 opened Nov 23, 2022 by inthesomeday000
1
About the variable "order_mask_backward" in protein_mpnn_utils.py, line 1085
#34 opened Dec 6, 2022 by phonez
2
mmseq clustering logic
#52 opened Jun 6, 2023 by OliviaViessmann
4
question about dataset
#53 opened Jun 9, 2023 by MaoSihong
training with a custom dataset
#54 opened Jun 12, 2023 by adrienchaton
6
Using multiple input structures for a single sequence output
#57 opened Jul 6, 2023 by acarbn
2
Error in running colab version.
#58 opened Jul 10, 2023 by SnehaBheemireddy
Choosing the redesigned structure
#59 opened Jul 14, 2023 by barthelemymp
How to prepare input files for fine-tuning with multimers?
#60 opened Jul 22, 2023 by gezmi
1
What constitutes a "low quality" backbone?
#61 opened Jul 29, 2023 by bwllc
4
some issues about jsonl files
#18 opened Aug 22, 2022 by sirius777coder
1
Designing Interface Residues
#62 opened Jul 31, 2023 by linamp
1
question: prob vs log_prob matrices
#71 opened Oct 3, 2023 by agarrubio
Where is the LigandMPNN
#72 opened Oct 19, 2023 by chengyunzhang
2
From 2 distinct structure to a single sequence ?
#75 opened Nov 9, 2023 by PodevynLoris
4
Indexing with Missing Residues
#77 opened Nov 17, 2023 by brucejwittmann
4
Clarify 'design chains'
#78 opened Dec 5, 2023 by jadolfbr
1
conditional_probs_only_backbone is ignored when used alone
#80 opened Dec 13, 2023 by TCoulth
parse_cif_noX.py misses some chains in CATH?
#82 opened Dec 17, 2023 by tyang816
2
Training model
#83 opened Dec 29, 2023 by luoyu5023
Retrieve per-position scores or score a chain in the context of another
#84 opened Jan 19, 2024 by amin-sagar
whether to redesign low confidence aas
#85 opened Jan 20, 2024 by 18217265596
How should I generate the fasta if my pdb file names chains as "H, L, C" rather than "A, B, C"?
#126 opened Mar 5, 2025 by JonasLi-19
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