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Fail to start workspace agent #3128

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migdur opened this issue Nov 19, 2016 · 3 comments
Closed

Fail to start workspace agent #3128

migdur opened this issue Nov 19, 2016 · 3 comments
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kind/question Questions that haven't been identified as being feature requests or bugs.

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@migdur
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migdur commented Nov 19, 2016

Che failing to succesfully start a workspace agent

Reproduction Steps:

  1. Che up and running
  2. Create workspace (eg. Python 2.7, but tried with others)
  3. [Other Steps...]

Expected behavior:

Observed behavior:

Workspace creates and initializes correctly. Runtime is correctly started but the workspace agent initialization is failing. Project cannot be created inside the workspace.

Che version: 4.7.2
OS and version: Windows 7 Professional 64 bit
Docker version: 1.12.2 (API 1.24)
Che install: server (eclipse-che-latest zip)

Additional information:
Log:
[default] [DOCKER] 2.7: Pulling from codenvy/ubuntu_python
[default] [DOCKER] Digest: sha256:ab9caddab203062765dd81ea313dad27afcda76a9d569a5c6951c65d62efe608
[default] [DOCKER] Status: Image is up to date for codenvy/ubuntu_python:2.7
[default] [DOCKER] Step 1 : FROM codenvy/ubuntu_python:2.7
[default] [DOCKER] ---> 3551fcad3fd5
[STDOUT] Listening for transport dt_socket at address: 4403
[STDOUT] 2016-11-19 17:11:05,796[main] [INFO ] [o.a.c.s.VersionLoggerListener 89] - Server version: Apache Tomcat/8.0.32
[STDOUT] 2016-11-19 17:11:05,799[main] [INFO ] [o.a.c.s.VersionLoggerListener 91] - Server built: Feb 2 2016 19:34:53 UTC
[STDOUT] 2016-11-19 17:11:05,801[main] [INFO ] [o.a.c.s.VersionLoggerListener 93] - Server number: 8.0.32.0
[STDOUT] 2016-11-19 17:11:05,803[main] [INFO ] [o.a.c.s.VersionLoggerListener 95] - OS Name: Linux
[STDOUT] 2016-11-19 17:11:05,804[main] [INFO ] [o.a.c.s.VersionLoggerListener 97] - OS Version: 4.4.27-boot2docker
[STDOUT] 2016-11-19 17:11:05,804[main] [INFO ] [o.a.c.s.VersionLoggerListener 99] - Architecture: amd64
[STDOUT] 2016-11-19 17:11:05,807[main] [INFO ] [o.a.c.s.VersionLoggerListener 101] - Java Home: /opt/jre1.8.0_65
[STDOUT] 2016-11-19 17:11:05,808[main] [INFO ] [o.a.c.s.VersionLoggerListener 103] - JVM Version: 1.8.0_65-b17
[STDOUT] 2016-11-19 17:11:05,809[main] [INFO ] [o.a.c.s.VersionLoggerListener 105] - JVM Vendor: Oracle Corporation
[STDOUT] 2016-11-19 17:11:05,811[main] [INFO ] [o.a.c.s.VersionLoggerListener 107] - CATALINA_BASE: /home/user/che/ws-agent
[STDOUT] 2016-11-19 17:11:05,811[main] [INFO ] [o.a.c.s.VersionLoggerListener 109] - CATALINA_HOME: /home/user/che/ws-agent
[STDOUT] 2016-11-19 17:11:05,813[main] [INFO ] [o.a.c.s.VersionLoggerListener 115] - Command line argument: -Djava.util.logging.config.file=/home/user/che/ws-agent/conf/logging.properties
[STDOUT] 2016-11-19 17:11:05,816[main] [INFO ] [o.a.c.s.VersionLoggerListener 115] - Command line argument: -Djava.util.logging.manager=org.apache.juli.ClassLoaderLogManager
[STDOUT] 2016-11-19 17:11:05,819[main] [INFO ] [o.a.c.s.VersionLoggerListener 115] - Command line argument: -Xms256m
[STDOUT] 2016-11-19 17:11:05,819[main] [INFO ] [o.a.c.s.VersionLoggerListener 115] - Command line argument: -Xmx2048m
[STDOUT] 2016-11-19 17:11:05,820[main] [INFO ] [o.a.c.s.VersionLoggerListener 115] - Command line argument: -Djava.security.egd=file:/dev/./urandom
[STDOUT] 2016-11-19 17:11:05,822[main] [INFO ] [o.a.c.s.VersionLoggerListener 115] - Command line argument: -Dche.logs.dir=/home/user/che/ws-agent/logs
[STDOUT] 2016-11-19 17:11:05,823[main] [INFO ] [o.a.c.s.VersionLoggerListener 115] - Command line argument: -agentlib:jdwp=transport=dt_socket,address=4403,server=y,suspend=n
[STDOUT] 2016-11-19 17:11:05,824[main] [INFO ] [o.a.c.s.VersionLoggerListener 115] - Command line argument: -Dcom.sun.management.jmxremote
[STDOUT] 2016-11-19 17:11:05,831[main] [INFO ] [o.a.c.s.VersionLoggerListener 115] - Command line argument: -Dcom.sun.management.jmxremote.ssl=false
[STDOUT] 2016-11-19 17:11:05,832[main] [INFO ] [o.a.c.s.VersionLoggerListener 115] - Command line argument: -Dcom.sun.management.jmxremote.authenticate=false
[STDOUT] 2016-11-19 17:11:05,832[main] [INFO ] [o.a.c.s.VersionLoggerListener 115] - Command line argument: -Dche.local.conf.dir=/mnt/che/conf
[STDOUT] 2016-11-19 17:11:05,832[main] [INFO ] [o.a.c.s.VersionLoggerListener 115] - Command line argument: -Djava.endorsed.dirs=/home/user/che/ws-agent/endorsed
[STDOUT] 2016-11-19 17:11:05,833[main] [INFO ] [o.a.c.s.VersionLoggerListener 115] - Command line argument: -Dcatalina.base=/home/user/che/ws-agent
[STDOUT] 2016-11-19 17:11:05,835[main] [INFO ] [o.a.c.s.VersionLoggerListener 115] - Command line argument: -Dcatalina.home=/home/user/che/ws-agent
[STDOUT] 2016-11-19 17:11:05,836[main] [INFO ] [o.a.c.s.VersionLoggerListener 115] - Command line argument: -Djava.io.tmpdir=/home/user/che/ws-agent/temp
[STDOUT] 2016-11-19 17:11:06,033[main] [INFO ] [o.a.c.http11.Http11NioProtocol 425] - Initializing ProtocolHandler ["http-nio-4401"]
[STDOUT] 2016-11-19 17:11:06,075[main] [INFO ] [o.a.t.util.net.NioSelectorPool 72] - Using a shared selector for servlet write/read
[STDOUT] 2016-11-19 17:11:06,079[main] [INFO ] [o.a.catalina.startup.Catalina 591] - Initialization processed in 610 ms
[STDOUT] 2016-11-19 17:11:06,166[main] [INFO ] [c.m.JmxRemoteLifecycleListener 332] - The JMX Remote Listener has configured the registry on port 32002 and the server on port 32102 for the Platform server
[STDOUT] 2016-11-19 17:11:06,167[main] [INFO ] [o.a.c.core.StandardService 435] - Starting service Catalina
[STDOUT] 2016-11-19 17:11:06,167[main] [INFO ] [o.a.c.core.StandardEngine 259] - Starting Servlet Engine: Apache Tomcat/8.0.32
[STDOUT] 2016-11-19 17:11:06,287[ost-startStop-1] [INFO ] [o.a.c.startup.HostConfig 910] - Deploying web application archive /home/user/che/ws-agent/webapps/wsagent.war
[STDOUT] 2016-11-19 17:11:12,997[ost-startStop-1] [ERROR] [o.a.c.c.C.[.[.[/wsagent] 4818] - Exception sending context initialized event to listener instance of class org.eclipse.che.inject.CheBootstrap
[STDOUT] com.google.common.util.concurrent.UncheckedExecutionException: com.google.common.util.concurrent.UncheckedExecutionException: java.lang.SecurityException: class "org.eclipse.jdt.internal.core.Openable"'s signer information does not match signer information of other classes in the same package
[STDOUT] at com.google.common.cache.LocalCache$Segment.get(LocalCache.java:2203) ~[guava-18.0.jar:na]
[STDOUT] at com.google.common.cache.LocalCache.get(LocalCache.java:3937) ~[guava-18.0.jar:na]
[STDOUT] at com.google.common.cache.LocalCache.getOrLoad(LocalCache.java:3941) ~[guava-18.0.jar:na]
[STDOUT] at com.google.common.cache.LocalCache$LocalLoadingCache.get(LocalCache.java:4824) ~[guava-18.0.jar:na]
[STDOUT] at com.google.common.cache.LocalCache$LocalLoadingCache.getUnchecked(LocalCache.java:4830) ~[guava-18.0.jar:na]
[STDOUT] at com.google.inject.internal.FailableCache.get(FailableCache.java:48) ~[guice-4.1.0.jar:na]
[STDOUT] at com.google.inject.internal.ConstructorInjectorStore.get(ConstructorInjectorStore.java:50) ~[guice-4.1.0.jar:na]
[STDOUT] at com.google.inject.internal.ConstructorBindingImpl.initialize(ConstructorBindingImpl.java:138) ~[guice-4.1.0.jar:na]
[STDOUT] at com.google.inject.internal.InjectorImpl.initializeBinding(InjectorImpl.java:536) ~[guice-4.1.0.jar:na]
[STDOUT] at com.google.inject.internal.AbstractBindingProcessor$Processor$1.run(AbstractBindingProcessor.java:160) ~[guice-4.1.0.jar:na]
[STDOUT] at com.google.inject.internal.ProcessedBindingData.initializeBindings(ProcessedBindingData.java:44) ~[guice-4.1.0.jar:na]
[STDOUT] at com.google.inject.internal.InternalInjectorCreator.initializeStatically(InternalInjectorCreator.java:123) ~[guice-4.1.0.jar:na]
[STDOUT] at com.google.inject.internal.InternalInjectorCreator.build(InternalInjectorCreator.java:107) ~[guice-4.1.0.jar:na]
[STDOUT] at com.google.inject.Guice.createInjector(Guice.java:99) ~[guice-4.1.0.jar:na]
[STDOUT] at org.everrest.guice.servlet.EverrestGuiceContextListener.getInjector(EverrestGuiceContextListener.java:140) ~[everrest-integration-guice-1.13.1.jar:na]
[STDOUT] at com.google.inject.servlet.GuiceServletContextListener.contextInitialized(GuiceServletContextListener.java:47) ~[guice-servlet-4.1.0.jar:na]
[STDOUT] at org.everrest.guice.servlet.EverrestGuiceContextListener.contextInitialized(EverrestGuiceContextListener.java:85) ~[everrest-integration-guice-1.13.1.jar:na]
[STDOUT] at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4812) [catalina.jar:8.0.32]
[STDOUT] at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5255) [catalina.jar:8.0.32]
[STDOUT] at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:147) [catalina.jar:8.0.32]
[STDOUT] at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:725) [catalina.jar:8.0.32]
[STDOUT] at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:701) [catalina.jar:8.0.32]
[STDOUT] at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:717) [catalina.jar:8.0.32]
[STDOUT] at org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:939) [catalina.jar:8.0.32]
[STDOUT] at org.apache.catalina.startup.HostConfig$DeployWar.run(HostConfig.java:1812) [catalina.jar:8.0.32]
[STDOUT] at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) [na:1.8.0_65]
[STDOUT] at java.util.concurrent.FutureTask.run(FutureTask.java:266) [na:1.8.0_65]
[STDOUT] at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) [na:1.8.0_65]
[STDOUT] at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) [na:1.8.0_65]
[STDOUT] at java.lang.Thread.run(Thread.java:745) [na:1.8.0_65]
[STDOUT] Caused by: com.google.common.util.concurrent.UncheckedExecutionException: java.lang.SecurityException: class "org.eclipse.jdt.internal.core.Openable"'s signer information does not match signer information of other classes in the same package
[STDOUT] at com.google.common.cache.LocalCache$Segment.get(LocalCache.java:2203) ~[guava-18.0.jar:na]
[STDOUT] at com.google.common.cache.LocalCache.get(LocalCache.java:3937) ~[guava-18.0.jar:na]
[STDOUT] at com.google.common.cache.LocalCache.getOrLoad(LocalCache.java:3941) ~[guava-18.0.jar:na]
[STDOUT] at com.google.common.cache.LocalCache$LocalLoadingCache.get(LocalCache.java:4824) ~[guava-18.0.jar:na]
[STDOUT] at com.google.common.cache.LocalCache$LocalLoadingCache.getUnchecked(LocalCache.java:4830) ~[guava-18.0.jar:na]
[STDOUT] at com.google.inject.internal.FailableCache.get(FailableCache.java:48) ~[guice-4.1.0.jar:na]
[STDOUT] at com.google.inject.internal.MembersInjectorStore.get(MembersInjectorStore.java:68) ~[guice-4.1.0.jar:na]
[STDOUT] at com.google.inject.internal.ConstructorInjectorStore.createConstructor(ConstructorInjectorStore.java:75) ~[guice-4.1.0.jar:na]
[STDOUT] at com.google.inject.internal.ConstructorInjectorStore.access$000(ConstructorInjectorStore.java:29) ~[guice-4.1.0.jar:na]
[STDOUT] at com.google.inject.internal.ConstructorInjectorStore$1.create(ConstructorInjectorStore.java:37) ~[guice-4.1.0.jar:na]
[STDOUT] at com.google.inject.internal.ConstructorInjectorStore$1.create(ConstructorInjectorStore.java:33) ~[guice-4.1.0.jar:na]
[STDOUT] at com.google.inject.internal.FailableCache$1.load(FailableCache.java:37) ~[guice-4.1.0.jar:na]
[STDOUT] at com.google.common.cache.LocalCache$LoadingValueReference.loadFuture(LocalCache.java:3527) ~[guava-18.0.jar:na]
[STDOUT] at com.google.common.cache.LocalCache$Segment.loadSync(LocalCache.java:2319) ~[guava-18.0.jar:na]
[STDOUT] at com.google.common.cache.LocalCache$Segment.lockedGetOrLoad(LocalCache.java:2282) ~[guava-18.0.jar:na]
[STDOUT] at com.google.common.cache.LocalCache$Segment.get(LocalCache.java:2197) ~[guava-18.0.jar:na]
[STDOUT] ... 29 common frames omitted
[STDOUT] Caused by: java.lang.SecurityException: class "org.eclipse.jdt.internal.core.Openable"'s signer information does not match signer information of other classes in the same package
[STDOUT] at java.lang.ClassLoader.checkCerts(ClassLoader.java:895) ~[na:1.8.0_65]
[STDOUT] at java.lang.ClassLoader.preDefineClass(ClassLoader.java:665) ~[na:1.8.0_65]
[STDOUT] at java.lang.ClassLoader.defineClass(ClassLoader.java:758) ~[na:1.8.0_65]
[STDOUT] at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142) ~[na:1.8.0_65]
[STDOUT] at org.apache.catalina.loader.WebappClassLoaderBase.findClassInternal(WebappClassLoaderBase.java:2469) ~[catalina.jar:8.0.32]
[STDOUT] at org.apache.catalina.loader.WebappClassLoaderBase.findClass(WebappClassLoaderBase.java:835) ~[catalina.jar:8.0.32]
[STDOUT] at org.apache.catalina.loader.WebappClassLoaderBase.loadClass(WebappClassLoaderBase.java:1277) ~[catalina.jar:8.0.32]
[STDOUT] at org.apache.catalina.loader.WebappClassLoaderBase.loadClass(WebappClassLoaderBase.java:1142) ~[catalina.jar:8.0.32]
[STDOUT] at java.lang.ClassLoader.defineClass1(Native Method) ~[na:1.8.0_65]
[STDOUT] at java.lang.ClassLoader.defineClass(ClassLoader.java:760) ~[na:1.8.0_65]
[STDOUT] at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142) ~[na:1.8.0_65]
[STDOUT] at org.apache.catalina.loader.WebappClassLoaderBase.findClassInternal(WebappClassLoaderBase.java:2469) ~[catalina.jar:8.0.32]
[STDOUT] at org.apache.catalina.loader.WebappClassLoaderBase.findClass(WebappClassLoaderBase.java:835) ~[catalina.jar:8.0.32]
[STDOUT] at org.apache.catalina.loader.WebappClassLoaderBase.loadClass(WebappClassLoaderBase.java:1277) ~[catalina.jar:8.0.32]
[STDOUT] at org.apache.catalina.loader.WebappClassLoaderBase.loadClass(WebappClassLoaderBase.java:1142) ~[catalina.jar:8.0.32]
[STDOUT] at java.lang.Class.getDeclaredFields0(Native Method) ~[na:1.8.0_65]
[STDOUT] at java.lang.Class.privateGetDeclaredFields(Class.java:2583) ~[na:1.8.0_65]
[STDOUT] at java.lang.Class.getDeclaredFields(Class.java:1916) ~[na:1.8.0_65]
[STDOUT] at com.google.inject.spi.InjectionPoint.getInjectionPoints(InjectionPoint.java:675) ~[guice-4.1.0.jar:na]
[STDOUT] at com.google.inject.spi.InjectionPoint.forInstanceMethodsAndFields(InjectionPoint.java:380) ~[guice-4.1.0.jar:na]
[STDOUT] at com.google.inject.internal.MembersInjectorStore.createWithListeners(MembersInjectorStore.java:93) ~[guice-4.1.0.jar:na]
[STDOUT] at com.google.inject.internal.MembersInjectorStore.access$000(MembersInjectorStore.java:37) ~[guice-4.1.0.jar:na]
[STDOUT] at com.google.inject.internal.MembersInjectorStore$1.create(MembersInjectorStore.java:45) ~[guice-4.1.0.jar:na]
[STDOUT] at com.google.inject.internal.MembersInjectorStore$1.create(MembersInjectorStore.java:42) ~[guice-4.1.0.jar:na]
[STDOUT] at com.google.inject.internal.FailableCache$1.load(FailableCache.java:37) ~[guice-4.1.0.jar:na]
[STDOUT] at com.google.common.cache.LocalCache$LoadingValueReference.loadFuture(LocalCache.java:3527) ~[guava-18.0.jar:na]
[STDOUT] at com.google.common.cache.LocalCache$Segment.loadSync(LocalCache.java:2319) ~[guava-18.0.jar:na]
[STDOUT] at com.google.common.cache.LocalCache$Segment.lockedGetOrLoad(LocalCache.java:2282) ~[guava-18.0.jar:na]
[STDOUT] at com.google.common.cache.LocalCache$Segment.get(LocalCache.java:2197) ~[guava-18.0.jar:na]
[STDOUT] ... 44 common frames omitted
[STDOUT] 2016-11-19 17:11:13,228[ost-startStop-1] [ERROR] [o.a.c.c.C.[.[.[/wsagent] 4818] - Exception sending context initialized event to listener instance of class org.eclipse.che.everrest.ServerContainerInitializeListener
[STDOUT] java.lang.NullPointerException: null
[STDOUT] at com.google.common.base.Preconditions.checkNotNull(Preconditions.java:210) ~[guava-18.0.jar:na]
[STDOUT] at org.everrest.core.impl.RequestDispatcher.(RequestDispatcher.java:84) ~[everrest-core-1.13.1.jar:na]
[STDOUT] at org.eclipse.che.everrest.ServerContainerInitializeListener.getEverrestProcessor(ServerContainerInitializeListener.java:165) ~[che-core-api-core-4.7.2.jar:4.7.2]
[STDOUT] at org.eclipse.che.everrest.ServerContainerInitializeListener.createWsServerEndpointConfig(ServerContainerInitializeListener.java:123) ~[che-core-api-core-4.7.2.jar:4.7.2]
[STDOUT] at org.eclipse.che.everrest.ServerContainerInitializeListener.contextInitialized(ServerContainerInitializeListener.java:91) ~[che-core-api-core-4.7.2.jar:4.7.2]
[STDOUT] at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4812) [catalina.jar:8.0.32]
[STDOUT] at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5255) [catalina.jar:8.0.32]
[STDOUT] at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:147) [catalina.jar:8.0.32]
[STDOUT] at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:725) [catalina.jar:8.0.32]
[STDOUT] at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:701) [catalina.jar:8.0.32]
[STDOUT] at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:717) [catalina.jar:8.0.32]
[STDOUT] at org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:939) [catalina.jar:8.0.32]
[STDOUT] at org.apache.catalina.startup.HostConfig$DeployWar.run(HostConfig.java:1812) [catalina.jar:8.0.32]
[STDOUT] at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) [na:1.8.0_65]
[STDOUT] at java.util.concurrent.FutureTask.run(FutureTask.java:266) [na:1.8.0_65]
[STDOUT] at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) [na:1.8.0_65]
[STDOUT] at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) [na:1.8.0_65]
[STDOUT] at java.lang.Thread.run(Thread.java:745) [na:1.8.0_65]
[STDOUT] 2016-11-19 17:11:13,230[ost-startStop-1] [ERROR] [o.a.c.core.StandardContext 5256] - One or more listeners failed to start. Full details will be found in the appropriate container log file
[STDOUT] 2016-11-19 17:11:13,236[ost-startStop-1] [ERROR] [o.a.c.core.StandardContext 5307] - Context [/wsagent] startup failed due to previous errors
[STDOUT] 2016-11-19 17:11:13,263[ost-startStop-1] [INFO ] [o.a.c.startup.HostConfig 974] - Deployment of web application archive /home/user/che/ws-agent/webapps/wsagent.war has finished in 6,975 ms
[STDOUT] 2016-11-19 17:11:13,264[ost-startStop-1] [INFO ] [o.a.c.startup.HostConfig 1030] - Deploying web application directory /home/user/che/ws-agent/webapps/ROOT
[STDOUT] 2016-11-19 17:11:13,373[ost-startStop-1] [INFO ] [o.a.c.startup.HostConfig 1142] - Deployment of web application directory /home/user/che/ws-agent/webapps/ROOT has finished in 109 ms
[STDOUT] 2016-11-19 17:11:13,379[main] [INFO ] [o.a.c.http11.Http11NioProtocol 470] - Starting ProtocolHandler ["http-nio-4401"]
[STDOUT] 2016-11-19 17:11:13,388[main] [INFO ] [o.a.catalina.startup.Catalina 642] - Server startup in 7308 ms

  • Problem started happening recently, didn't happen in an older version of Che: this is my first install.
  • Problem can be reliably reproduced, doesn't happen randomly: Yes
@TylerJewell TylerJewell added the kind/question Questions that haven't been identified as being feature requests or bugs. label Nov 19, 2016
@TylerJewell
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Really interesting - haven't seen this sort of exception trace before. Have you tried this on 5.0.0-M7 release to see if it exists there as well?

@migdur
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migdur commented Nov 19, 2016

Do you have a pointer to this release please?

@TylerJewell
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You should be setting CHE_VERSION (or the appropriate variable based upon the launcher technology that you are using). The list of versions that are available are available in the GitHub releases or in DockerHub tags - search on eclipse/che or eclipse/che-server.

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@TylerJewell @migdur