restore cdm_reader_mapper

Author: ludwiglierhammer

.flake8

@@ -0,0 +1,38 @@
+[flake8]
+exclude =
+	.git,
+	docs,
+	build,
+	.eggs,
+	tests
+ignore =
+	AZ100,
+	AZ200,
+	AZ300,
+	C,
+	D,
+	E,
+	F,
+	W503
+rst-directives =
+	bibliography,
+	autolink-skip
+rst-roles =
+	doc,
+	mod,
+	py:attr,
+	py:attribute,
+	py:class,
+	py:const,
+	py:data,
+	py:func,
+	py:indicator,
+	py:meth,
+	py:mod,
+	py:obj,
+	py:ref,
+	ref,
+	cite:cts,
+	cite:p,
+	cite:t,
+	cite:ts

.github/workflows/ci.yml

@@ -0,0 +1,73 @@
+name: cdm Testing Suite
+on:
+  push:
+    branches:
+      - "*"
+  pull_request:
+    branches:
+      - "*"
+
+concurrency:
+  group: ${{ github.workflow }}-${{ github.ref }}
+  cancel-in-progress: true
+
+jobs:
+  test:
+    name: py${{ matrix.python-version }}
+    runs-on: ${{ matrix.os }}
+    defaults:
+      run:
+        shell: bash -l {0}
+    strategy:
+      fail-fast: false
+      matrix:
+        os: ["ubuntu-latest"]
+        # Bookend python versions
+        python-version: ["3.9", "3.10", "3.11"]
+    steps:
+      - uses: actions/checkout@v3
+        with:
+          fetch-depth: 0 # Fetch all history for all branches and tags.
+      - name: Set environment variables
+        run: |
+          echo "CONDA_ENV_FILE=ci/requirements/environment.yml" >> $GITHUB_ENV
+          echo "PYTHON_VERSION=${{ matrix.python-version }}" >> $GITHUB_ENV
+
+      - name: Create conda environment
+        uses: mamba-org/provision-with-micromamba@main
+        with:
+          cache-downloads: true
+          cache-downloads-key: "${{runner.os}}-${{runner.arch}}-py${{matrix.python-version}}-${{hashFiles(env.CONDA_ENV_FILE)}}"
+          micromamba-version: 'latest'
+          environment-file: ci/requirements/environment.yml
+          extra-specs: |
+            python=${{ matrix.python-version }}
+
+      - name: Install cdm reader mapper toolbox
+        run: |
+          python -m pip install --no-deps -e .
+
+      - name: Version info
+        run: |
+          conda info -a
+          conda list
+
+      - name: Import cdm reader mapper toolbox
+        run: |
+          python -c "import cdm_reader_mapper"
+
+      - name: Run tests
+        timeout-minutes: 5
+        run: python -u -m pytest
+          --cov=cdm_reader_mapper
+          --cov-report=xml
+          --junitxml=test-results/${{ runner.os }}-${{ matrix.python-version }}.xml
+
+      - name: Upload code coverage to Codecov
+        uses: codecov/codecov-action@v3
+        with:
+          file: ./coverage.xml
+          flags: unittests
+          env_vars: RUNNER_OS,PYTHON_VERSION
+          name: codecov-umbrella
+          fail_ci_if_error: false