You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
I have followed the tutorial and so far all differential expression analyses worked if I did not specify a random variable.
This is how the ds_formula2 looks for me.
Hi,
I have followed the tutorial and so far all differential expression analyses worked if I did not specify a random variable.
This is how the ds_formula2 looks for me.
diffcyt(sce, formula = ds_formula2, contrast = contrast, analysis_type = "DS", method_DS = "diffcyt-DS-LMM", clustering_to_use = "merging_all", verbose = FALSE)
Has this occured before? I am not sure what the problem might be, as the differential expression works fine without specifying a random effect.
Thanks!
The text was updated successfully, but these errors were encountered: