ultrafast taxonomic profiling and genome querying for metagenomic samples by abundance-corrected minhash.
-
Updated
Mar 13, 2025 - Rust
#
metagenomics
Here are 13 public repositories matching this topic...
Fast, robust ANI and aligned fraction for (metagenomic) genomes and contigs.
-
Updated
Jul 14, 2024 - Rust
Kun-peng: an ultra-fast, low-memory footprint and accurate taxonomy classifier for all
-
Updated
Jan 29, 2025 - Rust
kmer based feature extraction tool for bioinformatics, metagenomics, AI/ML and more
-
Updated
Dec 13, 2024 - Rust
Viral genome coverage evaluation for metagenomic diagnostics 🩸
-
Updated
Dec 10, 2024 - Rust
MetagenOmic read Re-Assigner and abundance quantifier
-
Updated
Jan 31, 2025 - Rust
Host depletion optimised for clinical metagenomic sequencing applications 🐼
-
Updated
Nov 18, 2024 - Rust
🐦 spideog - Command line utility for Kraken2 reports.
-
Updated
Nov 30, 2020 - Rust
A taxonomic classifier for shotgun metagenomics reads
-
Updated
Feb 28, 2024 - Rust
Searching large collections of sequencing data with genome-scale queries
-
Updated
Mar 10, 2025 - Rust
Metagenomic diagnostics stack for low abundance sample types and clinical reporting
-
Updated
Mar 13, 2025 - Rust
Metagenomic toolbox / Outils de métagénomique
-
Updated
Feb 3, 2025 - Rust
PhageFilter uses a Sequence Bloom Tree (SBT) to filter bacteriophage reads from metagenomic files.
-
Updated
Dec 10, 2023 - Rust
Improve this page
Add a description, image, and links to the metagenomics topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the metagenomics topic, visit your repo's landing page and select "manage topics."