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Gartner-Lab

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  1. deMULTIplex2 deMULTIplex2 Public

    deMULTIplex2: robust sample demultiplexing for scRNA-seq

    R 13 1

  2. Concord Concord Public

    Python 1

  3. MULTI-seq MULTI-seq Public

    Forked from chris-mcginnis-ucsf/MULTI-seq

    R implementation of MULTI-seq sample classification workflow

    R

  4. DoubletFinder DoubletFinder Public

    Forked from chris-mcginnis-ucsf/DoubletFinder

    R package for detecting doublets in single-cell RNA sequencing data

    R

  5. deMULTIplex2_test_data deMULTIplex2_test_data Public

    test datasets for deMULTIplex2

  6. GutSPV GutSPV Public

    SPV model of intestinal villus clustering

    Python 1

Repositories

Showing 10 of 13 repositories
  • Concord Public
    Gartner-Lab/Concord’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Mar 17, 2025
  • Concord_benchmark Public

    Benchmarking script for CONCORD.

    Gartner-Lab/Concord_benchmark’s past year of commit activity
    Jupyter Notebook 0 CC-BY-4.0 0 0 0 Updated Mar 13, 2025
  • Concord_documentation Public

    Full documentation for Concord.

    Gartner-Lab/Concord_documentation’s past year of commit activity
    HTML 0 1 0 0 Updated Mar 8, 2025
  • MULTI-ATAC Public

    Companion code for Conrad, et al.

    Gartner-Lab/MULTI-ATAC’s past year of commit activity
    R 0 MIT 0 0 0 Updated Mar 6, 2025
  • deMULTIplex2 Public

    deMULTIplex2: robust sample demultiplexing for scRNA-seq

    Gartner-Lab/deMULTIplex2’s past year of commit activity
    R 13 CC-BY-4.0 1 0 0 Updated Feb 23, 2025
  • GutSPV Public

    SPV model of intestinal villus clustering

    Gartner-Lab/GutSPV’s past year of commit activity
    Python 0 1 0 0 Updated Jan 16, 2025
  • jdm-DECIPHER-2024 Public Forked from grabadam-cal/jdm-DECIPHER-2024

    Analysis code used for Rabadam et al. JCI Insight, 2024.

    Gartner-Lab/jdm-DECIPHER-2024’s past year of commit activity
    R 0 1 0 0 Updated Jun 4, 2024
  • deMULTIplex2-benchmark Public

    Code for benchmarking the performance of demultiplex2.

    Gartner-Lab/deMULTIplex2-benchmark’s past year of commit activity
    R 0 0 0 0 Updated Oct 11, 2023
  • BCC_Lattice_Model Public
    Gartner-Lab/BCC_Lattice_Model’s past year of commit activity
    MATLAB 0 0 0 0 Updated Jun 26, 2023
  • Organoid_Image_Processing Public

    MATLAB scripts for the processing and quantification of mammary organoid images

    Gartner-Lab/Organoid_Image_Processing’s past year of commit activity
    MATLAB 0 0 0 0 Updated Jun 26, 2023
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