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Mitter-lab

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  1. amiR_target_finder amiR_target_finder Public

    amiR_target_finder identifies a minimum set of artificial micoRNA/s (and their star strands) that can target all sequences in a FASTA format reference seqeunce file.

    Python

  2. ds_RNA_target_window ds_RNA_target_window Public

    Identifies optimal window for dsRNA targeting

    Python

  3. mitter_et_al_CMV_boxplot mitter_et_al_CMV_boxplot Public

    R

  4. mitter_et_al_R_code mitter_et_al_R_code Public

    R code for Nature Plants submission

    R

  5. trinity_unigene trinity_unigene Public

    Filter longest trinity transcript as unigene

    Python 1

  6. get_de_genes get_de_genes Public

    Python

Repositories

Showing 7 of 7 repositories
  • jain_et_al_code Public

    Publication code

    Jupyter Notebook 0 GPL-3.0 0 0 0 Updated Apr 10, 2022
  • mitter_et_al_R_code Public

    R code for Nature Plants submission

    R 0 MIT 0 0 0 Updated Oct 26, 2016
  • get_de_genes Public
    Python 0 MIT 0 0 0 Updated Oct 14, 2016
  • trinity_unigene Public

    Filter longest trinity transcript as unigene

    Python 0 MIT 1 0 0 Updated Sep 29, 2016
  • R 0 MIT 0 0 0 Updated May 5, 2016
  • amiR_target_finder Public

    amiR_target_finder identifies a minimum set of artificial micoRNA/s (and their star strands) that can target all sequences in a FASTA format reference seqeunce file.

    Python 0 MIT 0 0 0 Updated Mar 4, 2016
  • ds_RNA_target_window Public

    Identifies optimal window for dsRNA targeting

    Python 0 MIT 0 0 0 Updated Mar 4, 2016