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IBDGem v2.0
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@remynhn remynhn released this 15 Jun 17:26
· 12 commits to master since this release
v2.0
e4a6a32
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Learn about vigilant mode.
  • Added --LD option to account for linkage disequilibrium in IBD0 likelihood calculation using a set of reference samples from the genotype input, which can be specified via --background-list
  • Removed aggregate.c module (IBDGem now automatically outputs aggregated likelihoods to a summary file, with the number of SNPs per genomic segment determined via --window-size when running the main program)
  • Removed --threads due to negligible performance increase
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