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@RangamaniLabUCSD

RangamaniLabUCSD

Laboratory for Computational Cellular Mechanobiology

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  1. Mem3DG Mem3DG Public

    3D computational model for lipid membranes

    C++ 22 11

  2. smart smart Public

    Spatial Modeling Algorithms for Reactions and Transport

    Python 9 3

  3. CIUKF-MCMC CIUKF-MCMC Public

    Comprehensive uncertainty quantification framework for system biology

    Jupyter Notebook 4 2

  4. 2020-Mem3DG-Applications 2020-Mem3DG-Applications Public

    Jupyter Notebook 3 1

  5. Lee-Laughlin-GAMer2 Lee-Laughlin-GAMer2 Public

    High resolution movies and supplemental files

    2 1

  6. gamer gamer Public

    Forked from ctlee/gamer

    Geometry-preserving Adaptive Mesher

    C++ 1

Repositories

Showing 10 of 54 repositories
  • smart-nanopillars Public Forked from RangamaniLabUCSD/smart-comp-sci

    Model of mechanotransduction for cells on nanopillars, using SMART.

    RangamaniLabUCSD/smart-nanopillars’s past year of commit activity
    Jupyter Notebook 0 CC-BY-SA-4.0 1 0 0 Updated Mar 13, 2025
  • smart-tutorial Public

    A simple SMART tutorial to get started!

    RangamaniLabUCSD/smart-tutorial’s past year of commit activity
    Jupyter Notebook 0 CC-BY-SA-4.0 0 0 0 Updated Mar 9, 2025
  • SpineApparatus Public
    RangamaniLabUCSD/SpineApparatus’s past year of commit activity
    Python 0 0 0 0 Updated Feb 18, 2025
  • Mem3DG Public

    3D computational model for lipid membranes

    RangamaniLabUCSD/Mem3DG’s past year of commit activity
    C++ 22 MPL-2.0 11 4 1 Updated Feb 17, 2025
  • multimodel-inference Public

    Code for multimodel inference project

    RangamaniLabUCSD/multimodel-inference’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Feb 10, 2025
  • Tension-Propagation Public
    RangamaniLabUCSD/Tension-Propagation’s past year of commit activity
    MATLAB 0 GPL-3.0 0 0 0 Updated Feb 6, 2025
  • 2022-mitochondria-lipidomics-md Public
    RangamaniLabUCSD/2022-mitochondria-lipidomics-md’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jan 15, 2025
  • Dynamic_multimerization Public

    This repository has all the source code, input files, analysis scripts, and sample data used to simulate dynamic dimerization of proteins within condensates.

    RangamaniLabUCSD/Dynamic_multimerization’s past year of commit activity
    C++ 1 0 0 0 Updated Dec 19, 2024
  • membrane-spectrin-skeleton Public

    Theoretical model of spectrin membrane skeleton

    RangamaniLabUCSD/membrane-spectrin-skeleton’s past year of commit activity
    MATLAB 0 0 0 0 Updated Dec 3, 2024
  • smart Public

    Spatial Modeling Algorithms for Reactions and Transport

    RangamaniLabUCSD/smart’s past year of commit activity
    Python 9 LGPL-3.0 3 17 1 Updated Nov 13, 2024
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