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@V-GEN-Lab

V-GEN Lab

Viral Genomics, Evolution and Nexus Laboratory

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  1. DyDEVILS Public

    This repository contains the result of using a semi-automatic workflow for classifying Dengue virus (DENV) based on complete genome sequences. It addresses the current limitations in sub-genotype c…

    Python 2 1

  2. viper Public

    VIPER is a user-friendly software for assembling and identifying viral genomes (currently SARS-CoV-2, Dengue, and Influenza), from Illumina sequencing data generated through genomic surveillance.

    Shell 2

Repositories

Showing 5 of 5 repositories
  • dengue-lineages-workflow Public

    This repository contains the source code for the datasets used in the implementation of the dengue lineage system in NextClade. The organizational workflow was developed based on the workflow created for the m-pox virus, available at: https://github.com/nextstrain/mpox/tree/master/nextclade."

    Python 3 0 0 0 Updated Apr 2, 2025
  • ViperSubmit Public

    The SubmissionMode is a semi-automatic mode for handling and editing files for submission on the GISAID website.

    Python 0 0 0 0 Updated Jul 31, 2024
  • viper Public

    VIPER is a user-friendly software for assembling and identifying viral genomes (currently SARS-CoV-2, Dengue, and Influenza), from Illumina sequencing data generated through genomic surveillance.

    Shell 0 GPL-3.0 2 0 0 Updated Jun 20, 2024
  • DyDEVILS Public

    This repository contains the result of using a semi-automatic workflow for classifying Dengue virus (DENV) based on complete genome sequences. It addresses the current limitations in sub-genotype classification, offering a more granular and standardized system compared to traditional methods.

    Python 2 GPL-3.0 1 0 0 Updated Jun 13, 2024
  • CeVIVAS Public
    Jupyter Notebook 0 0 0 0 Updated Jun 11, 2024