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YogiBud/README.md

Hi there πŸ‘‹

My name is Yogesh, and I am a PhD candidate at the Ohio State University, specializing in genomics, computational biology, and cancer research. My current work focuses on leveraging genomics to advance our understanding of osteosarcoma and other cancers.

  • πŸ”­ I am currently working on Osteo-CAR, a transcriptomic exploration and cell-type annotation resource for osteosarcoma across multiple species, aiming to standardize cell-type annotations and harmonize terminology for research.
  • πŸ”­ I am also working on developing KITE-SCAN, a computational tool that predicts biologically informed tyrosine kinase inhibitors (TKIs) for cancer patients, optimizing efficacy while minimizing toxicity.
  • 🌱 I’m currently learning advanced computational biology techniques, RNA sequencing analysis, and bioinformatics tools to refine predictive models for precision medicine.

πŸ“« Feel free to reach out for collaborations or discussions on genomics, computational biology, cancer biology, and developing computational tools! email: budhathoki.3@osu.edu

πŸ›  Languages & Tools

πŸ§‘β€πŸ’» Programming Languages

R Python Bash

πŸ”¬ Genomics & Computational Tools

Bioconductor Seurat Linux

πŸ—‚ Version Control

Git GitHub

Pinned Loading

  1. kidcancerlab/Osteo_atlas kidcancerlab/Osteo_atlas Public

    1

  2. MCL1_early_met_survival MCL1_early_met_survival Public

    HTML

  3. kidcancerlab/rrrSingleCellUtils kidcancerlab/rrrSingleCellUtils Public

    Single cell analysis utility functions for the Ryan Roberts lab

    R 3 3

  4. kidcancerlab/NCH_Coder_Upgrade kidcancerlab/NCH_Coder_Upgrade Public

    Shell 1 7

  5. OSHetero2021 OSHetero2021 Public

    Forked from kidcancerlab/OSHetero2021

    Files supporting data analysis for the heterogeneity in osteosarcoma tissue tropism paper (Sanjana lead)

    HTML

  6. kidcancerlab/MCL1_early_met_survival kidcancerlab/MCL1_early_met_survival Public

    HTML