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Creates Random Coding Sequences with specified GC content, Amino Acid usage, Length, and Codon Utilization

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amarallab/NullSeq2.0

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NullSeq2.0

Creates Random Coding Sequences with specified GC content, Amino Acid usage, Length, and Codon Utilization

Setup

  1. Use pyenv to set up a clean environment using the Python version 3.4.1.
  2. pip install -r requirements.txt

Using NullSeq2.0

  1. navigate into the cloned repo on your local computer
  2. activate the pyenv enviorment that was setup in the previous section
  3. launch ipython noteboook using the command: ipython notebook
  4. click on the notebook tutorial.ipynb for tutorial

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Creates Random Coding Sequences with specified GC content, Amino Acid usage, Length, and Codon Utilization

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