ATGENOMIX
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deepvariant-on-spark
deepvariant-on-spark PublicDeepVariant-on-Spark is a germline short variant calling pipeline that runs Google DeepVariant on Apache Spark at scale.
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deepvariant
deepvariant PublicForked from google/deepvariant
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
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connectedreads
connectedreads Publica machine-learning optimized long-range genome analysis workflow for next-generation sequencing
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Repositories
- seqslab-plugin-api Public
- kneaddata Public Forked from biobakery/kneaddata
Quality control tool on metagenomic and metatranscriptomic sequencing data, especially data from microbiome experiments.
- seqslab-operators Public
Atgenomix Operators are SeqsLab platform plugins and open-source Cromwell extensions that streamline heterogeneous data integration and transformation, and scale complex workflow tasks, using distributed computing clusters and GPU accelerators.
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