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1. 4dn-dcic/pairix 4dn-dcic/pairix Public

   1D/2D indexing and querying on bgzipped text file with a pair of genomic coordinates

   C 88 14

2. 4dn-dcic/hic2cool 4dn-dcic/hic2cool Public

   Lightweight converter between hic and cool contact matrices.

   Python 68 7

3. 4dn-dcic/foursight 4dn-dcic/foursight Public

   Providing insight into your application using AWS infrastructure.

   Python 7

4. chip-seq-pipeline2 chip-seq-pipeline2 Public

   Forked from ENCODE-DCC/chip-seq-pipeline2

   ENCODE ChIP-seq pipeline

   Python

5. 4dn-dcic/tibanna_ff 4dn-dcic/tibanna_ff Public

   This is an extension of Tibanna that integrates with 4DN/CGAP/SMaHT data portals.

   Python 3

6. 4dn-dcic/Benchmark 4dn-dcic/Benchmark Public

   Python