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This is an update of the PinMol program with the following important changes:

  1. the input file format has been changed from sscount to ct format
  2. it is now platform-independent

Please check the old repositories for dependencies, requirements, and tutorials (under the Win version).

IN PROGRESS: a unified packages for designing Molecular Beacons, TFO and smFISH probes, which are ranked using a hybridization efficiency factor.

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