Skip to content
@imagej

ImageJ

Open source scientific multidimensional image processing

ImageJ is open source software for processing and analyzing scientific images.

ImageJ is the original desktop application which has been in development since 1997.

ImageJ2 is a new version of ImageJ targeting scientific multidimensional image data.

Pinned Loading

  1. ImageJ Public

    Public domain software for processing and analyzing scientific images

    Java 627 229

  2. imagej2 Public

    Open scientific N-dimensional image processing 🔬 🎇

    Java 1.2k 334

  3. example-legacy-plugin Public template

    Simple Maven project for an ImageJ 1.x plugin

    Java 34 41

  4. example-imagej2-command Public template

    Simple Maven project for an ImageJ2 command

    Java 30 18

  5. imagej.github.io Public

    The ImageJ wiki

    JavaScript 27 126

  6. tutorials Public

    ImageJ2 programming examples

    Jupyter Notebook 184 116

Repositories

Showing 10 of 84 repositories
  • imagej.github.io Public

    The ImageJ wiki

    JavaScript 27 126 63 (1 issue needs help) 3 Updated Mar 23, 2025
  • imagej-ui-swing Public

    ImageJ UI for Java Swing.

    Java 10 BSD-2-Clause 20 32 5 Updated Mar 21, 2025
  • imagej-updater Public

    The automatic updater for ImageJ

    Java 12 15 55 5 Updated Mar 21, 2025
  • ImageJ Public

    Public domain software for processing and analyzing scientific images

    Java 627 229 70 7 Updated Mar 19, 2025
  • pyimagej Public

    Use ImageJ from Python

    Python 494 85 52 2 Updated Mar 18, 2025
  • napari-imagej Public

    Use ImageJ functionality from napari

    Python 28 BSD-2-Clause 5 40 2 Updated Mar 18, 2025
  • ij1-patcher Public

    Extension points for ImageJ via runtime patching to support (limited) headless operation and ImageJ2's legacy layer

    Java 5 BSD-2-Clause 6 8 0 Updated Mar 17, 2025
  • imagej-legacy Public

    ImageJ+ImageJ2 compatibility layer

    Java 17 BSD-2-Clause 26 97 (1 issue needs help) 15 Updated Mar 17, 2025
  • list-of-update-sites Public

    The update sites ImageJ2 knows about automatically

    Python 6 93 1 1 Updated Mar 11, 2025
  • imagej-matlab Public

    MATLAB integration with ImageJ data structures and runtime.

    Java 14 BSD-2-Clause 6 15 0 Updated Feb 4, 2025