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Compilation of MATLAB utility functions written over the years

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.DS_Store
.DS_Store
 
 
AMI.m
AMI.m
 
 
Alistair_code.txt
Alistair_code.txt
 
 
Hill.m
Hill.m
 
 
README.txt
README.txt
 
 
Violin.m
Violin.m
 
 
__init__.py
__init__.py
 
 
bluewhitered.m
bluewhitered.m
 
 
bonf_holm.m
bonf_holm.m
 
 
calc_FC.m
calc_FC.m
 
 
calc_LaplacianMatrix.m
calc_LaplacianMatrix.m
 
 
calc_ami.m
calc_ami.m
 
 
calc_avg_connectome.m
calc_avg_connectome.m
 
 
calc_cortical_fingerprint.m
calc_cortical_fingerprint.m
 
 
calc_cortical_homogeneity.m
calc_cortical_homogeneity.m
 
 
calc_cortical_parc_metrics.m
calc_cortical_parc_metrics.m
 
 
calc_coscorr.m
calc_coscorr.m
 
 
calc_dice_matrix.m
calc_dice_matrix.m
 
 
calc_eigendecomposition.m
calc_eigendecomposition.m
 
 
calc_eta_squared.m
calc_eta_squared.m
 
 
calc_fragility.m
calc_fragility.m
 
 
calc_fragility_version2.m
calc_fragility_version2.m
 
 
calc_fragility_version3.m
calc_fragility_version3.m
 
 
calc_fragility_version4.m
calc_fragility_version4.m
 
 
calc_lag_projection.m
calc_lag_projection.m
 
 
calc_lag_projection_comparison_stats.m
calc_lag_projection_comparison_stats.m
 
 
calc_mean_parcel_size_normalized.m
calc_mean_parcel_size_normalized.m
 
 
calc_network_eigenmode.m
calc_network_eigenmode.m
 
 
calc_normalize_timeseries.m
calc_normalize_timeseries.m
 
 
calc_orderParameter.m
calc_orderParameter.m
 
 
calc_parcellate.m
calc_parcellate.m
 
 
calc_parcels_size.m
calc_parcels_size.m
 
 
calc_phase.m
calc_phase.m
 
 
calc_power_spectrum.m
calc_power_spectrum.m
 
 
calc_rescale.m
calc_rescale.m
 
 
calc_response_stats.m
calc_response_stats.m
 
 
calc_response_stats_version1_2.m
calc_response_stats_version1_2.m
 
 
calc_response_stats_version2.m
calc_response_stats_version2.m
 
 
calc_subcortical_fingerprint.m
calc_subcortical_fingerprint.m
 
 
calc_surface_connectivity.m
calc_surface_connectivity.m
 
 
calc_surface_connectome_connectivity.m
calc_surface_connectome_connectivity.m
 
 
calc_timescales.m
calc_timescales.m
 
 
calc_triu_ind.m
calc_triu_ind.m
 
 
construct_SH_basis.m
construct_SH_basis.m
 
 
convert_obj2vtk.m
convert_obj2vtk.m
 
 
coord2freq_1D.m
coord2freq_1D.m
 
 
corr_Tononi.m
corr_Tononi.m
 
 
corr_Zamora.m
corr_Zamora.m
 
 
corr_col.m
corr_col.m
 
 
create_shape_surface.m
create_shape_surface.m
 
 
create_spin_rotations.m
create_spin_rotations.m
 
 
ctfft.m
ctfft.m
 
 
decomposeEigenvectors.m
decomposeEigenvectors.m
 
 
draw_brainNetworks.m
draw_brainNetworks.m
 
 
draw_brainNetworks_fraction.m
draw_brainNetworks_fraction.m
 
 
draw_brain_nodeHighlight.m
draw_brain_nodeHighlight.m
 
 
draw_brain_nodeHighlight_2.m
draw_brain_nodeHighlight_2.m
 
 
draw_eigenvector_to_surface.m
draw_eigenvector_to_surface.m
 
 
draw_internode_brainNetworks.m
draw_internode_brainNetworks.m
 
 
draw_internode_brainNetworks_fast.m
draw_internode_brainNetworks_fast.m
 
 
draw_internode_brainNetworks_horizontalSnapshots.m
draw_internode_brainNetworks_horizontalSnapshots.m
 
 
draw_locationsBrain.m
draw_locationsBrain.m
 
 
draw_scatterBrain.m
draw_scatterBrain.m
 
 
draw_scatterBrain_allViews.m
draw_scatterBrain_allViews.m
 
 
draw_scatterBrain_fragility_horizontalSnapshots.m
draw_scatterBrain_fragility_horizontalSnapshots.m
 
 
draw_scatterBrain_horizontalTimeSnapshots.m
draw_scatterBrain_horizontalTimeSnapshots.m
 
 
draw_surface_bluewhitered.m
draw_surface_bluewhitered.m
 
 
draw_surface_bluewhitered_dull.m
draw_surface_bluewhitered_dull.m
 
 
draw_surface_bluewhitered_gallery.m
draw_surface_bluewhitered_gallery.m
 
 
draw_surface_bluewhitered_gallery_dull.m
draw_surface_bluewhitered_gallery_dull.m
 
 
draw_surface_parcellated_data_dull.m
draw_surface_parcellated_data_dull.m
 
 
draw_surface_parcellation_dull.m
draw_surface_parcellation_dull.m
 
 
draw_tricorrmat.m
draw_tricorrmat.m
 
 
draw_tricorrmat_withbubbles.m
draw_tricorrmat_withbubbles.m
 
 
draw_volume_bluewhitered.m
draw_volume_bluewhitered.m
 
 
draw_volume_bluewhitered_gallery.m
draw_volume_bluewhitered_gallery.m
 
 
draw_volume_parcellation.m
draw_volume_parcellation.m
 
 
extract_hemisphere_indices.m
extract_hemisphere_indices.m
 
 
extract_matrix_triu_vals.m
extract_matrix_triu_vals.m
 
 
extract_parcellations.m
extract_parcellations.m
 
 
extract_pvalue_text.m
extract_pvalue_text.m
 
 
extract_scatterBrain_locs_edges.m
extract_scatterBrain_locs_edges.m
 
 
extracting_single_trace_for_pang.m
extracting_single_trace_for_pang.m
 
 
fdr_bh.m
fdr_bh.m
 
 
fit_sigmoid.m
fit_sigmoid.m
 
 
freq2coord_1D.m
freq2coord_1D.m
 
 
func_complexity.m
func_complexity.m
 
 
generate_frequencyDist.m
generate_frequencyDist.m
 
 
geombinsurr_partial_old.m
geombinsurr_partial_old.m
 
 
get_HCP_task_contrasts.m
get_HCP_task_contrasts.m
 
 
get_centroid_and_volume.m
get_centroid_and_volume.m
 
 
get_cortical_parc_list.m
get_cortical_parc_list.m
 
 
get_subcortical_parc_list.m
get_subcortical_parc_list.m
 
 
loadParameters_balloon_func.m
loadParameters_balloon_func.m
 
 
loadParameters_wave_func.m
loadParameters_wave_func.m
 
 
manual_datafetching_from_cluster.m
manual_datafetching_from_cluster.m
 
 
mesh_laplacian.m
mesh_laplacian.m
 
 
model_BOLD_balloon.m
model_BOLD_balloon.m
 
 
model_BOLD_balloon_temp.m
model_BOLD_balloon_temp.m
 
 
model_neural_waves.m
model_neural_waves.m
 
 

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Compilation of utility functions for analysis and visualization

James Pang
QIMR Berghofer 2018-2021
Monash University 2021-present

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Compilation of MATLAB utility functions written over the years

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