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Jefferis Lab

4 followers
Cambridge, UK
http://jefferislab.github.io/

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MakeAverageBrain MakeAverageBrain Public

Make average template brains using CMTK’s avg_adm tool

Shell 5 3
catnat catnat Public

neuroanatomy toolbox – CATMAID extension functions

R 1 2
drvid drvid Public

Forked from natverse/drvid

Access to DVID API

R

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All Batchfile C C++ HTML ImageJ Macro Java JavaScript MATLAB PostScript R Ruby Shell

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Showing 10 of 46 repositories

racq4 Public
Analysis of acq4 data in R

jefferislab/racq4’s past year of commit activity

R 0 GPL-3.0 0 0 0 Updated Feb 11, 2025
BridgingRegistrations Public
Bridging registrations to convert between different Drosophila template brains

jefferislab/BridgingRegistrations’s past year of commit activity

5 3 3 0 Updated Dec 10, 2024
DrosophilidDBM Public
R code for Deformation Based Morphometry across Drosophilid species

jefferislab/DrosophilidDBM’s past year of commit activity

R 1 0 0 0 Updated Dec 2, 2024
RANN Public
R package providing fast nearest neighbour search (wraps ANN library)

jefferislab/RANN’s past year of commit activity

R 58 13 4 0 Updated Aug 25, 2024
STAR Public
Keeping https://github.com/cran/STAR alive

jefferislab/STAR’s past year of commit activity

R 0 0 0 0 Updated Jun 12, 2024
MicroManagerStrobePlugin Public
A plugin developed for MicroManager / ImageJ to coordinate pulsed LED illumination with image acquisition

jefferislab/MicroManagerStrobePlugin’s past year of commit activity

Java 0 0 0 0 Updated Jan 30, 2024
catnat Public
neuroanatomy toolbox – CATMAID extension functions

jefferislab/catnat’s past year of commit activity

R 1 2 5 0 Updated Aug 31, 2023
ImageJMacros Public
General Jefferis Lab ImageJ macros – e.g. split lsms

jefferislab/ImageJMacros’s past year of commit activity

ImageJ Macro 1 2 0 0 Updated Jul 1, 2023
skeleton-to-MIP Public

jefferislab/skeleton-to-MIP’s past year of commit activity

HTML 0 GPL-3.0 0 0 0 Updated Apr 21, 2023
2023_cVA_Taisz_Galili Public
Public code for Taisz, Galili et al. (2023)

jefferislab/2023_cVA_Taisz_Galili’s past year of commit activity

R 0 GPL-3.0 0 0 0 Updated Apr 21, 2023

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