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@lemieux-lab

lemieux-lab

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  1. BiDRA BiDRA Public

    HTML 1

  2. BamQuery BamQuery Public

    BamQuery provides RNA-seq quantification for a given peptide (from 8 to 11 residues) in chosen RNA-seq samples (single or bulk).

    Python 5 2

  3. pepid pepid Public

    Highly customizable research-oriented peptide search engine

    Python 2 1

  4. kct-walk kct-walk Public

    k-mer walking with kct. Extends a seed without needing to come back to a reference.

    Julia

  5. bidra_robustness bidra_robustness Public

    Jupyter Notebook

  6. myCircos myCircos Public

    myCircos web interface code

    HTML 1 1

Repositories

Showing 10 of 27 repositories
  • GDC_public Public
    lemieux-lab/GDC_public’s past year of commit activity
    Julia 0 MIT 0 0 0 Updated Mar 31, 2025
  • UMAP_gpu Public

    Code structure and examples to run UMAP on GPU (python CuML implementations)

    lemieux-lab/UMAP_gpu’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Mar 25, 2025
  • transcriptomics_survival Public
    lemieux-lab/transcriptomics_survival’s past year of commit activity
    0 MIT 0 0 0 Updated Mar 24, 2025
  • k-mers Public

    Experimenting with k-mers package, custom implemntations for k-mers, experimental KCTs

    lemieux-lab/k-mers’s past year of commit activity
    Julia 0 0 0 0 Updated Feb 12, 2025
  • bidra_robustness Public
    lemieux-lab/bidra_robustness’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jan 31, 2025
  • FactorizedEmbeddings.jl Public
    lemieux-lab/FactorizedEmbeddings.jl’s past year of commit activity
    HTML 0 MIT 0 1 5 Updated Dec 16, 2024
  • leonard_thesis Public
    lemieux-lab/leonard_thesis’s past year of commit activity
    HTML 0 0 0 0 Updated Nov 22, 2024
  • DDPM_predoc Public
    lemieux-lab/DDPM_predoc’s past year of commit activity
    Julia 0 0 0 0 Updated Oct 23, 2024
  • BamQuery Public

    BamQuery provides RNA-seq quantification for a given peptide (from 8 to 11 residues) in chosen RNA-seq samples (single or bulk).

    lemieux-lab/BamQuery’s past year of commit activity
    Python 5 MIT 2 4 0 Updated Aug 12, 2024
  • PoissonJUMP-DDPM-RNA Public
    lemieux-lab/PoissonJUMP-DDPM-RNA’s past year of commit activity
    Julia 1 0 0 0 Updated Jul 11, 2024
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