bio_cordoba2016

Course notes for bioinformatics seminar at University of Cordoba 2016

Course outline

1. Theory behind Association Studies
2. Different approaches to conduct a GWAS analysis
3. Quality Control (QC)
4. Run a GWAS analysis
5. GWAS outputs. Manhattan plots
6. Bio Programs: PLINK, BEAGLE, ADMIXTURE, ...
7. Other: Genetic variability, factorial analysis, distances matrix, genetic trees, ...
8. ROH
9. CNV
10. Selection footprints
11. Formats: VCF, ...