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don't crash if we have no long nodes, estimate coverage to 0 compile and e.coli #697: Commit 9f9faea pushed by skoren
March 20, 2025 14:59 7m 39s master
master
March 20, 2025 14:59 7m 39s
remove hardcoded haplotype names in csv, use whatever user input instead compile and e.coli #696: Commit 7a4d838 pushed by skoren
March 20, 2025 14:57 40s master
master
March 20, 2025 14:57 40s
add visited list when traversing bubbles (fix #323) compile and e.coli #695: Commit 2ef1a3f pushed by skoren
March 14, 2025 21:06 6m 22s master
master
March 14, 2025 21:06 6m 22s
update canu tag compile and e.coli #694: Commit cdc0dd4 pushed by skoren
February 24, 2025 16:18 7m 35s master
master
February 24, 2025 16:18 7m 35s
new chunkgraph version compile and e.coli #693: Commit baac418 pushed by maickrau
February 13, 2025 07:46 2m 18s r10_only
r10_only
February 13, 2025 07:46 2m 18s
new chunkgraph version compile and e.coli #692: Commit 9beea58 pushed by maickrau
February 8, 2025 07:17 2m 0s r10_only
r10_only
February 8, 2025 07:17 2m 0s
update canu to include bugfix compile and e.coli #691: Commit 95099ad pushed by skoren
January 31, 2025 14:38 7m 4s master
master
January 31, 2025 14:38 7m 4s
skip nodes completely composed of a gapfill compile and e.coli #690: Commit 2c7336d pushed by skoren
January 31, 2025 14:25 7m 41s master
master
January 31, 2025 14:25 7m 41s
Fix incorrect logging (issue #319) compile and e.coli #689: Commit 9a78f76 pushed by skoren
January 28, 2025 22:44 7m 10s master
master
January 28, 2025 22:44 7m 10s
wip compile and e.coli #688: Commit 7642ac9 pushed by Dmitry-Antipov
January 25, 2025 19:44 7m 15s phasing_ref
phasing_ref
January 25, 2025 19:44 7m 15s
new chunkgraph version compile and e.coli #687: Commit 8eb3988 pushed by maickrau
January 6, 2025 10:36 2m 24s r10_only
r10_only
January 6, 2025 10:36 2m 24s
try to fix gcc version in CI compile and e.coli #686: Commit 9d8a620 pushed by skoren
December 19, 2024 18:19 7m 13s master
master
December 19, 2024 18:19 7m 13s
Update makefile.yml compile and e.coli #685: Commit cb323bc pushed by skoren
December 19, 2024 17:30 3m 57s master
master
December 19, 2024 17:30 3m 57s
Update makefile.yml compile and e.coli #684: Commit cc16adf pushed by skoren
December 19, 2024 16:05 3m 15s master
master
December 19, 2024 16:05 3m 15s
fix int conversion compile and e.coli #683: Commit fe49501 pushed by skoren
December 19, 2024 15:48 2m 1s master
master
December 19, 2024 15:48 2m 1s
filter out high copy count nodes from layout compile and e.coli #682: Commit fbcee95 pushed by maickrau
December 14, 2024 12:20 3m 0s r10_only
r10_only
December 14, 2024 12:20 3m 0s
alndbg resolve parameter compile and e.coli #681: Commit 45fa2a4 pushed by maickrau
December 12, 2024 11:46 6m 32s r10_only
r10_only
December 12, 2024 11:46 6m 32s
new alndbg commit compile and e.coli #680: Commit 9154c4e pushed by maickrau
December 12, 2024 09:14 7m 3s r10_only
r10_only
December 12, 2024 09:14 7m 3s
fix compile and e.coli #679: Commit c981e8b pushed by maickrau
December 5, 2024 10:51 6m 8s r10_only
r10_only
December 5, 2024 10:51 6m 8s
fix memory estimate for chunkgraph compile and e.coli #678: Commit cbb0c4a pushed by maickrau
December 4, 2024 13:15 6m 55s r10_only
r10_only
December 4, 2024 13:15 6m 55s
fix compile and e.coli #677: Commit cb5e93d pushed by maickrau
December 4, 2024 12:25 7m 37s r10_only
r10_only
December 4, 2024 12:25 7m 37s
no correction, fix awk call compile and e.coli #676: Commit 83ecec7 pushed by maickrau
December 4, 2024 12:14 7m 16s r10_only
r10_only
December 4, 2024 12:14 7m 16s
replace graph building with chunkgraph compile and e.coli #675: Commit 51b1963 pushed by maickrau
December 4, 2024 10:46 7m 36s r10_only
r10_only
December 4, 2024 10:46 7m 36s
inherit settings and data from previous assembly when using --paths compile and e.coli #674: Commit 7d57bda pushed by skoren
November 19, 2024 15:30 7m 12s master
master
November 19, 2024 15:30 7m 12s
remove bashism (#298) compile and e.coli #673: Commit 4bc7665 pushed by skoren
October 28, 2024 13:54 7m 2s master
master
October 28, 2024 13:54 7m 2s