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@phytooracle

PhytoOracle

Code for extracting phenotypic insights from plant phenomics data. Developed by Drs. Duke Pauli & Eric Lyons labs at the University of Arizona

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  1. automation Public

    Modular, Scalable Phenomic Data Processing Pipelines

    Python 5 4

  2. ezobde Public

    EZOBDE | EaZy Object Detection

    Python 2

  3. pcd_ecc Public

    Extract Euler Characteristic Curves (ECC) from 3D point cloud data (PCD).

    Python 2

Repositories

Showing 10 of 90 repositories
  • SorghumPartNet Public

    DGCNN Segmentation of Sorghum (focal plant and leaf segmentation)

    Jupyter Notebook 4 GPL-3.0 0 0 0 Updated Apr 24, 2025
  • automation Public

    Modular, Scalable Phenomic Data Processing Pipelines

    Python 5 MIT 4 2 1 Updated Mar 24, 2025
  • 3d_entropy_features Public
    Python 0 0 0 0 Updated Mar 24, 2025
  • 3d_neighbor_removal Public Forked from schmiggle/Phytooracle_tasks
    Python 0 1 0 0 Updated Mar 24, 2025
  • flir_bin_to_tif_s17 Public
    Python 0 BSD-3-Clause 0 0 0 Updated Mar 21, 2025
  • flir_bin_to_tif_s11 Public
    Python 0 BSD-3-Clause 1 0 0 Updated Mar 20, 2025
  • flir_bin_to_tif_s10 Public

    Conversion of FLIR bin files to geoTIFFs with calibration

    Python 0 BSD-3-Clause 0 0 0 Updated Mar 20, 2025
  • 3d_landmark_selection Public

    3D Module: GUI for point cloud landmark selection

    Python 0 MIT 0 1 0 Updated Dec 18, 2024
  • phytooracle_data Public
    Python 0 0 2 0 Updated Dec 12, 2024
  • phenotype_extraction_update Public
    R 0 0 0 0 Updated Nov 4, 2024
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