Create, manage, and run Jupyter notebooks with their dependencies

Linearising and de-linearising functions for `nalgebra`'s `Point`s.

DuckDB Extension Linearization/Delinearization, Z-Order, Hilbert and Morton Curves

Pure bash script to test and wait on the availability of a TCP host and port

Phylogenetic compression of extremely large genome collections [661k ↘𝟭𝟲𝗚𝗶𝗕 | BIGSIdata ↘𝟰𝟴𝗚𝗶𝗕 | AllTheBact'23 ↘𝟳𝟱𝗚𝗶𝗕]

A Python library for fast, interactive geospatial vector data visualization in Jupyter.

A Jupyter widget for comparing two embeddings with shared labels by their confusion, neighborhoods, and size.

Bioinformatics I/O libraries in Rust

A Rust code linter

A standalone Jupyter Widget for HiGlass

MONSDA, Modular Organizer of Nextflow and Snakemake driven hts Data Analysis

Read specialized NGS formats as data frames in R, Python, and more.

Query SQLite files in S3 using s3fs

Rust wrapper of the BWA C API

A high-performance BigWig and BigBed library in Rust

Neural network emulator for guitar amplifiers.

Powering AWS purpose-built machine learning chips. Blazing fast and cost effective, natively integrated into PyTorch and TensorFlow and integrated with your favorite AWS services

reusable widgets made easy

Gaussian processes with PyTorch

a dashboard for exploring d3 examples

API to structured data

Structural variant and indel caller for mapped sequencing data

Configure workflow/pipeline tests using yaml files.

A multiple sequence alignment viewer

a python api for higlass

Python library for GFF / GTF reference files

A library for history/provenance tracking in web-based visualizations.