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cb01d74 · Mar 10, 2022

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scRNAaltas_TNBC_mm

A pipeline for the scRNAseq data analysis of TNBC mouse model

  1. Step - Create the count matrix/bam file from FASTQ files. (sankemake pipeline - singularity container - PBS cluster). This step is the one published in Carpen et al., 2022, Cell Death Discovery