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@saalfeldlab

Saalfeld Lab

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  1. n5 n5 Public

    Not HDF5

    Java 177 22

  2. paintera paintera Public

    Java 104 17

  3. stitching-spark stitching-spark Public

    Reconstruct big images from overlapping tiled images on a Spark cluster.

    Java 35 10

  4. render render Public

    Render transformed image tiles

    Java 34 33

  5. bigwarp bigwarp Public

    A tool for manual pointwise deformable registration using bigdataviewer.

    Java 28 14

  6. n5-viewer n5-viewer Public

    BigDataViewer-based tool for visualizing multichannel multiscale N5 datasets.

    Java 19 11

Repositories

Showing 10 of 106 repositories
  • render Public

    Render transformed image tiles

    saalfeldlab/render’s past year of commit activity
    Java 34 GPL-2.0 33 29 6 Updated Apr 22, 2025
  • hot-knife Public
    saalfeldlab/hot-knife’s past year of commit activity
    Java 4 GPL-2.0 7 1 2 Updated Apr 21, 2025
  • n5-hdf5 Public

    Best effort N5 implementation on HDF5 files (despite the irony).

    saalfeldlab/n5-hdf5’s past year of commit activity
    Java 6 BSD-2-Clause 10 4 2 Updated Apr 15, 2025
  • n5-universe Public

    Functionality shared across all n5

    saalfeldlab/n5-universe’s past year of commit activity
    Java 1 BSD-2-Clause 5 6 2 Updated Apr 15, 2025
  • n5-google-cloud Public

    N5 library implementation using Google Cloud Storage backend.

    saalfeldlab/n5-google-cloud’s past year of commit activity
    Java 1 BSD-2-Clause 3 2 0 Updated Apr 15, 2025
  • n5-aws-s3 Public

    N5 library implementation using Amazon Web Services S3 backend.

    saalfeldlab/n5-aws-s3’s past year of commit activity
    Java 5 BSD-2-Clause 6 5 0 Updated Apr 15, 2025
  • n5 Public

    Not HDF5

    saalfeldlab/n5’s past year of commit activity
    Java 177 BSD-2-Clause 22 18 8 Updated Apr 15, 2025
  • organelle-mapping Public
    saalfeldlab/organelle-mapping’s past year of commit activity
    Python 0 MIT 1 0 0 Updated Apr 11, 2025
  • n5-imglib2 Public
    saalfeldlab/n5-imglib2’s past year of commit activity
    Java 0 BSD-2-Clause 8 4 2 Updated Apr 9, 2025
  • corditea Public

    Utility nodes for gunpowder

    saalfeldlab/corditea’s past year of commit activity
    Python 0 BSD-2-Clause 0 0 0 Updated Apr 9, 2025
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