Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.
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Apr 28, 2025 - Python
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variants
Here are 62 public repositories matching this topic...
PEPPER-Margin-DeepVariant
nanopore variants variant-calling oxford-nanopore genome-variation long-reads pacbio-ccs assembly-polishing
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Jan 12, 2024 - Python
Odoo modules enabling dynamic product configuration
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Apr 28, 2022 - Python
Characterization of Germline variants
bioinformatics annotations clinical variants characterization pathogenicity clinvar vep diseases pathogenic-variants germline-variants exac acmg gnomad
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Mar 15, 2022 - Python
Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24
python bioinformatics server genomics health variants global rna genome-annotation ga4gh reference-implementation alliance
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Jan 24, 2018 - Python
MyVariant.info: A BioThings API for human variant annotations
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Apr 15, 2025 - Python
ClairS-TO - a deep-learning method for tumor-only somatic variant calling
bioinformatics deep-learning nanopore genomics somatic-variants variants pacbio variant-calling somatic-mutations illumina snvs long-reads ont long-read-sequencing tumors tumor-only
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Mar 25, 2025 - Python
Generic human DNA variant annotation pipeline
docker workflow gene singularity vcf variants snv vep disease-gene-association indels annotation-tool vcfanno germline variant-annotations annotation-framework snvs
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Feb 13, 2024 - Python
Command line tools for CMDB varaints browser
bioinformatics database vcf variants cmdb chinese-genome-database chinese-millionome-database genomics-api
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May 14, 2024 - Python
[deprecated] 🧬 Python API to fetch gnomAD data
genomics variants bioinformatics-databases genomics-data gnomad gnomad-python-api genome-aggregation-database
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Dec 9, 2021 - Python
pathoscore evaluates variant pathogenicity tools and scores.
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Mar 25, 2022 - Python
Split a BAM file by haplotype support
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Dec 13, 2017 - Python
基于tensorflow2.x实现bert及其变体的预训练模型加载架构
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Nov 28, 2020 - Python
WebApp for DNA variants interpretation
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Apr 18, 2025 - Python
VPOT - Variant Prioritisation Ordering Tool. VPOT is a Python tool written to allow prioritisation of variants in ANNOVAR annotated VCF files.
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Oct 27, 2021 - Python
Filters for Next Generation Sequencing
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Oct 31, 2024 - Python
A MatchMaker Exchange server
gene variants matchmaker score matchmaking diagnosis similarity-score hpo-similarity patients omim matching-algorithm matchmaking-server patient-matching
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Sep 4, 2024 - Python
A python package containing all the basic functions and classes for python. From simple addition to advanced file encryption.
python git cli package library encryption everything functions pypi path pip classes variants readthedocs gitit advanced-programming encryption-decryption setup-tool basic-programming
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Apr 7, 2022 - Python
Clinical machine-learning based interpreter of germline mutations.
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Mar 13, 2025 - Python
ClinVar Submission API Made Easy
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Apr 28, 2025 - Python
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