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1. crc-atlas crc-atlas Public

   Forked from icbi-lab/crc-atlas

   Single-cell Colorectal Cancer Atlas with 4.27M cells

   Python

2. scrnaseq-calprotectin-organoids scrnaseq-calprotectin-organoids Public

   Python 1

3. nf-bulk-pipeline nf-bulk-pipeline Public

   nf-pipeline template for custom data analysis, renders report

   R 1

4. scrnaseq-gpx4-mouse scrnaseq-gpx4-mouse Public

   Python

5. atlas_protocol atlas_protocol Public

   Forked from icbi-lab/atlas_protocol

   A computational protocol for atlas-level data integration and analysis as performed in Salcher et al. (2022).

   Jupyter Notebook

6. icbi-lab/nf-deseq2 icbi-lab/nf-deseq2 Public

   A RNA-seq differential expression analysis pipeline downstream of nf-core/rnaseq.

   R 6 5