gkarthik
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bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
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baltic Public
Forked from evogytis/balticbaltic - backronymed adaptable lightweight tree import code for molecular phylogeny manipulation, analysis and visualisation. Development is back on the evogytis/baltic branch (i.e. here).
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transmission-rule-out Public
Forked from batson/transmission-rule-outEstimating the power of SARS-CoV-2 genomic data to rule-out transmission events.
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COVID-19 Public
Forked from CSSEGISandData/COVID-19Novel Coronavirus (COVID-19) Cases, provided by JHU CSSE
2 UpdatedAug 13, 2021 -
covid_sequencing_analysis_pipeline Public
Forked from ucsd-ccbb/C-VIEWAWS optimized pipeline based on https://github.com/niemasd/SD-COVID-Sequencing
Python MIT License UpdatedMar 20, 2021 -
artic-ncov2019 Public
Forked from artic-network/artic-ncov2019ARTIC nanopore protocol for nCoV2019 novel coronavirus
Python Creative Commons Attribution 4.0 International UpdatedFeb 18, 2021 -
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beast-mcmc Public
Forked from beast-dev/beast-mcmcBayesian Evolutionary Analysis Sampling Trees
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nanofilt Public
Forked from wdecoster/nanofiltFiltering and trimming of long read sequencing data
Python GNU General Public License v3.0 UpdatedDec 17, 2019 -
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zika-isnv Public
Forked from nickloman/zika-isnvZika iSNV detection on nanopore
HTML MIT License UpdatedJul 11, 2018 -
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Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)
C GNU General Public License v3.0 UpdatedApr 10, 2018