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523 Open 1,706 Closed
523 Open 1,706 Closed
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Issues list

update module: portcullis/full update module
#8159 opened Mar 28, 2025 by anoronh4
4 tasks done
@anoronh4
1
MLST Unit Tests Fail bug Something isn't working
#8152 opened Mar 27, 2025 by acvander
2 tasks done
new module: ARACNe3 new module Adding a new module
#8142 opened Mar 26, 2025 by stikos
4 tasks done
1
@stikos
new module: VIPER new module Adding a new module
#8136 opened Mar 26, 2025 by ddomenico
3 of 4 tasks
1
@ddomenico
nf-core lint fails with eigenv variable name bug Something isn't working
#8113 opened Mar 26, 2025 by bruno-ariano
2 tasks done
new module: deconwolf new module Adding a new module
#8109 opened Mar 26, 2025 by felixS27
4 tasks done
update module: rsem/calculateexpression and rsem/preparereference update module
#8108 opened Mar 26, 2025 by delagoya
4 tasks done
1
1
new module: integron_finder new module Adding a new module
#8094 opened Mar 26, 2025 by nguyent-son
4 tasks done
@nguyent-son
new module: seqtk/comp new module Adding a new module
#8091 opened Mar 26, 2025 by sainsachiko
4 tasks done
@sainsachiko
Migrate the accession_metadata.nf module new module Adding a new module
#8089 opened Mar 26, 2025 by Dishalodha
3 of 4 tasks
@shradhaebi
2
update module: update GATK Mutect2 to identifies mutations in the individual’s mtDNA. update module
#8062 opened Mar 25, 2025 by JelPej
3 of 4 tasks
new subworkflow: update module samtools to Extracts reads that align to the mitochondrial genome (from BAM file). new subworkflow
#8060 opened Mar 25, 2025 by JelPej
3 of 4 tasks
new module: platon new module Adding a new module
#8048 opened Mar 25, 2025 by jhayer
4 tasks done
@jhayer
BIOHANSEL inconsistency unitest between conda and containers bug Something isn't working
#8034 opened Mar 25, 2025 by LouisLeNezet
2 tasks done
1
nf-test failing for gatk4/mutect2 bug Something isn't working
#8033 opened Mar 25, 2025 by scorreard
2 tasks done
nf-test failing for pharokka bug Something isn't working
#8032 opened Mar 25, 2025 by scorreard
2 tasks done
nf-test failing for strelka/somatic bug Something isn't working
#8031 opened Mar 25, 2025 by scorreard
2 tasks done
new module: meryl/print new module Adding a new module
#8023 opened Mar 25, 2025 by SwiftSeal
4 tasks done
new module: winnowmap/align new module Adding a new module
#8022 opened Mar 25, 2025 by SwiftSeal
4 tasks done
1
new module: LanceOtron new module Adding a new module
#8017 opened Mar 25, 2025 by aubinthomas
4 tasks done
@aubinthomas @bridlin
new module: raw2ometiff new module Adding a new module
#8015 opened Mar 25, 2025 by CaroAMN
4 tasks done
1
@CaroAMN
new module: metabuli/build new module Adding a new module
#8014 opened Mar 25, 2025 by pawelciurkaardigen
3 of 4 tasks
1
@pawelciurkaardigen @MichalStachowiakArdigen
update module: need to create tests for getorganelle/fromreads update module
#8007 opened Mar 25, 2025 by scorreard
4 tasks done
3
Template for Javascript filters
#8002 opened Mar 24, 2025 by jen-reeve
Identify optional inputs (files)
#8001 opened Mar 24, 2025 by jen-reeve
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