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54 repositories
- SAA: A tool to visually analyze varying software artifacts including source code files, pull requests, issues, and commits, as well as their links and their relationships with developers in a software project to improve the software development process
newt
PublicA web application to visualize and edit pathway modelscool
Publicsbgnviz.js
PublicA web based visualization tool for process description maps in SBGNvisuall-advanced-query
Publicchise.js
PublicA web application to visualize and edit the pathway models represented by SBGN Process Description Notationcytoscape.js-fcose
PublicfCoSE: a fast Compound Spring Embedder- A Cytoscape.js extension to expand/collapse nodes for better management of complexity of compound graphs
syblars
PublicSyBLaRS: Systems Biology Layout & Rendering Servicesybvals
PublicSyBValS: Systems Biology Validation Service- A Cytoscape.js extension to provide grapples to resize nodes
- A Cytoscape.js extension to provide context menu around elements and core instance
- A Cytoscape.js extension enabling interactive editing of edge anchor (bend or control) points
- A Cytoscape.js extension to provide copy-paste utilities
cytosnap
Publiccytoscape.js-cise
PublicAn implementation of the circular layout algorithm by Dogrusoz et al. as a Cytoscape.js extensionpathway-mapper
PublicPathwayMapper: An interactive and collaborative graphical curation tool for cancer pathwayscytoscape.js-visual-cues
Publiccmgm
Public- A Cytsocape.js extension to automatically pan when nodes are out of canvas bounds
cytoscape.js-layvo
Publiccytoscape.js-grid-guide
PublicA Cytsocape.js extension to provide a framework for grid interactions such as grid lines and snapping to grid, and guidelines and snap support for alignment of nodes.cose-base
Publiccytoscape.js-avsdf
Publiclayout-base
Public