evalue-thresholds

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laelbarlow / jackhmmerer

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A snakemake workflow for iterative sequence profile searching using jackhmmer from the HMMer3 package.

protein-sequences similarity-search homology-search snakemake-workflow hmmer3 jackhmmer evalue-thresholds

Updated Apr 13, 2021
Python

Anand-Research-Group / complex-I

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This repository contains a set of scripts and workflows designed to search for Respiratory Complex I (NADH Ubiquinone Oxidoreductase) subunits in prokaryotic genomes and proteomes.

bioinformatics biopython protein-sequences proteome homology-search mafft mmseqs2 fasttree prokaryotic-genomes hmmer3 species-distribution evalue-thresholds operons iqtree2 protein-sequences-tree

Updated Mar 10, 2025
Jupyter Notebook

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evalue-thresholds

Here are 2 public repositories matching this topic...

laelbarlow / jackhmmerer

Anand-Research-Group / complex-I

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