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Port two-scale-heat-conduction case from DuMuX-Adapter #375

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Fujikawas
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  • Port the case to DuMuX-Adapter new version for precice V3.0.0;
  • Rearrange the folder structure to cooperate with the Nutil-Nutil coupling;
  • Set the environment to run the case directly from current folder;
  • Update relevant documentations and guides;

BenjaminRodenberg and others added 30 commits December 16, 2022 17:24
* Update broken link
* Remove redundancy for less maintainment
Fix broken link and minor update
#318)

* replaced all <use-mesh> tags by <receive-mesh> and <provide-mesh> tags in */precice-config.xml in order to make it compatible with current preCICE versions

* added changelog 318.md for this PR

* Update changelog-entries/318.md

Co-authored-by: David Schneider <david.schneider@ipvs.uni-stuttgart.de>

Co-authored-by: timo-schrader <timo-schrader>
Co-authored-by: David Schneider <david.schneider@ipvs.uni-stuttgart.de>
* adding fenicsx solver to partitioned-heat-equation tutorial

* Delete printStats.py

* cleanup work

* changed README.md

* output reference solution

* Changed output folder
* Remove mapping timings

* Add changelog entry
* Build cpp solvers as part of run

* Update elastic-tube-1d/fluid-cpp/run.sh

Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

* Fix solid-cpp run

Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

---------

Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>
Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>
Co-authored-by: Valentin Seitz <valentin.seitz@tum.de>
Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>
Co-authored-by: Valentin Seitz <valentin.seitz@tum.de>
* - Added fenics adapter
- straightend out the nameing of build_arguments to be more uniform around the code

* Update tools/tests/README.md

Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

---------

Co-authored-by: Valentin Seitz <valentin.seitz@tum.de>
Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>
Co-authored-by: Valentin Seitz <valentin.seitz@tum.de>
Instead the docker container now runs a non root user by design of the container

Co-authored-by: Valentin Seitz <valentin.seitz@tum.de>
valentin-seitz and others added 13 commits August 14, 2023 17:09
* moved completelty to new syntax, Fixed some bugs

* Introduce lfs filter for .tar.gz

* - Introduces correct return code
- Updated test syntax to include reference_results
- introduced working generation of reference results

* added reference data

* make autopep8 happy

* make check_md happy

* Update tools/tests/paths.py

Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

* Delete nutils.Dockerfile

---------

Co-authored-by: Valentin Seitz <valentin.seitz@tum.de>
Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>
Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>
* Initial commit - add Nutils macro and micro participants

* Initial code for macro and micro cases with DuMux

* Add cmake file for compiling DuMux code

* Remove DuMux case for now

* Initial content in README and simplifying config scripts

* Use standard name of preCICE config

* Add cleaning script

* Add clean scripts for macro- and micro- Nutils

* Use copies of Nutils objects while getting the state

* Add image and modify clean-tutorial.sh

* Reducing computational time of the macro-micro case and adding content to README

* Making the case cheaper and finalizing README

* Formatting

* Update two-scale-heat-conduction/README.md

Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

* Apply suggestions from code review

Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

* Add run scripts for macro and micro Nutils participants

* Simplifying README and formatting precice-config

* Add tutorial prefix name to image filename

* Rename image file

* Add shebang in clean-tutorial.sh

* Use quotes while passing numbers of procs to run.sh

* Incorporating changes

* Add correct file relative paths

* Port case to v3

* Add results image in README and do some formatting

* Add results image

* Add micro simulation results and descriptions of outputs

* Change width of images in README

* Remove width parameter, it does not work

* Small typos

---------

Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>
* Added first working prototype

* added working fenics  adapter

* remove comments

* added working nutils "adapter"

* added not working calclulix -adapter

* reorder dockerfile

* make autopep8 happy

* fix print_case_combinations

* WIP

* WIP

* - Introduced logging instead of prints
- refactored into exceptions instead of exit(1)
-

* - Added Nutils
- Added Calculix
- Added reference results for some cases
- Added heat exchanger tutorial
- Added logging and more verbose output
- Added timing output

* Split building docker and running tutorial

* adopt to requested chnages:
- fallow-arguments vs std-legacy
- no nutils adapter, just install nutils

* - Adopt .md to .metadata
- generate new reference results

* - added overview table

* added script to only build dockers to warmup cache

* Update tools/tests/components.yaml

Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>

* make autpep8 happy

---------

Co-authored-by: Valentin Seitz <valentin.seitz@tum.de>
Co-authored-by: Gerasimos Chourdakis <chourdak@in.tum.de>
@Fujikawas Fujikawas closed this Sep 30, 2023
@Fujikawas Fujikawas deleted the add-du-du-heat-conduction branch September 30, 2023 20:44
@Fujikawas Fujikawas restored the add-du-du-heat-conduction branch September 30, 2023 20:45
@Fujikawas Fujikawas deleted the add-du-du-heat-conduction branch September 30, 2023 20:46
@Fujikawas Fujikawas restored the add-du-du-heat-conduction branch September 30, 2023 21:01
@uekerman
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replaced by #376

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